PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00622g09013.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | MYB_related | ||||||||
Protein Properties | Length: 209aa MW: 23651.6 Da PI: 8.7373 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.4 | 1.2e-16 | 15 | 76 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT................-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg................tWktIartmgkgRtlkqcksrwqky 47 +g+WT+eEd ll ++++++G g W++Ia +++ gRt++++k++w+++ Peinf101Scf00622g09013.1 15 KGAWTEEEDFLLRKCIEKYGEGkwhlvpvragkqtctiKWSLIAGRIP-GRTANDVKNYWNTH 76 79**********************************************.************87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 2.5E-18 | 7 | 81 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 17.826 | 10 | 81 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 3.35E-12 | 12 | 73 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 3.1E-14 | 14 | 79 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 9.3E-15 | 15 | 76 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 2.25E-11 | 17 | 76 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence Send to blast |
MNTIPICTST LGVRKGAWTE EEDFLLRKCI EKYGEGKWHL VPVRAGKQTC TIKWSLIAGR 60 IPGRTANDVK NYWNTHYRRK LISLQRQGKK CRSAIKITEN TIIRPQPRSF SSTKNVSLGS 120 NKSITNSTIH KDESSKRVVR TNEKQTTEAL TDNGFQWWAS LLDDPNEFDE EAAAGSTAFC 180 KINSEEETPT SLQEGETGWG DIDLWSLLN |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019240653.1 | 5e-72 | PREDICTED: transcription factor MYB113-like | ||||
Refseq | XP_019240654.1 | 5e-72 | PREDICTED: transcription factor MYB113-like | ||||
TrEMBL | A0A3S6QBC9 | 1e-140 | A0A3S6QBC9_PETIN; Anthocyanin synthesis regulator 3 | ||||
STRING | XP_009626596.1 | 7e-65 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA12 | 24 | 2154 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56650.1 | 2e-33 | production of anthocyanin pigment 1 |