PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00614g11014.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | ERF | ||||||||
Protein Properties | Length: 315aa MW: 35127.9 Da PI: 6.3714 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.6 | 2.3e-16 | 109 | 160 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g Peinf101Scf00614g11014.1 109 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 160 89****99**********99966...3.6*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 0.053 | 30 | 80 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 9.216 | 46 | 74 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.18E-6 | 46 | 76 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 1.0E-5 | 47 | 75 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 7.2E-12 | 109 | 160 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.26E-24 | 109 | 170 | No hit | No description |
SuperFamily | SSF54171 | 6.54E-18 | 109 | 170 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 18.386 | 110 | 168 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 6.0E-26 | 110 | 174 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.4E-18 | 110 | 169 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 9.6E-5 | 111 | 122 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 9.6E-5 | 150 | 170 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 315 aa Download sequence Send to blast |
MAKLSQQKQK NSSNNIANDT TTANGTVLKV KRTRKTIPRD SPPQRAYDDE EAASHAYDLA 60 ALKYWGSDTI LNFPLSTYGK EIKEMEGQSR EAYIGSLRRK SSGFSRGVSK YRGVARHHHN 120 GRWEARIGRV FGNKYLYLGT YATQEEAATA YDMAAIEYRG QNAVTNFDLS RYMKWLRPNN 180 NNNVNEPNPN FETNTISTSN HSIGSTSTST STMTATSATT ILDPSLCQTQ PPSATSALGL 240 LLQSSKFKEM MEMALENDYS PAPVESNPPQ SSFPEDLKTY FDIQDSGCYG DQGEDLIFNE 300 INTFMQPVMQ FDFGA |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009793520.1 | 1e-164 | PREDICTED: AP2-like ethylene-responsive transcription factor At1g16060 | ||||
Swissprot | Q94AN4 | 2e-81 | AP2L1_ARATH; AP2-like ethylene-responsive transcription factor At1g16060 | ||||
TrEMBL | A0A1U7Y412 | 1e-162 | A0A1U7Y412_NICSY; AP2-like ethylene-responsive transcription factor At1g16060 | ||||
STRING | XP_009793520.1 | 1e-163 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1815 | 24 | 64 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79700.2 | 1e-64 | AP2 family protein |
Publications ? help Back to Top | |||
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