PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00613g07001.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

Dof

Protein Properties

Length: 269aa MW: 30163.7 Da PI: 7.1219

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00613g07001.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	107.2	8.6e-34	39	96	3	60
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 + l+cprC s ntkfCyynny+ sqPr++Ck+C+r+Wt+GG+lrn+PvGggr+++++ Peinf101Scf00613g07001.1 39 PEPLSCPRCGSINTKFCYYNNYNKSQPRHYCKGCKRHWTAGGTLRNIPVGGGRKNKRT 96 67899**********************************************9776665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	1.0E-20	35	95	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	7.4E-30	41	95	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	26.776	42	96	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	44	80	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence Send to blast
MGLSTKLVSI DDHGLDSCQN SLQELPKPPP IRNQPTSKPE PLSCPRCGSI NTKFCYYNNY 60 NKSQPRHYCK GCKRHWTAGG TLRNIPVGGG RKNKRTRPTA HSVDHITGRK YVTLEVNDRR 120 CPLITTTITT PTTSNVSSYT IRGNSIIDEG KKEYDIFYET LNIASSSLPL DHTYFSFSSI 180 GHAPCSVPDY VQSSNAYEYM GKFDSTMEES TITTVMPITS SSSLSQSWQV QESSNLVENM 240 PSTYWNWNEI DTLSAADLNI PWDDLEIKP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009624330.1	1e-117	PREDICTED: uncharacterized protein LOC104115407
TrEMBL	A0A1S3Z8N7	1e-115	A0A1S3Z8N7_TOBAC; uncharacterized protein LOC107784185
STRING	XP_009624330.1	1e-117	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA6171	20	33

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66940.1	3e-27	Dof family protein