PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00586g11030.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ARR-B
Protein Properties Length: 712aa    MW: 77599.6 Da    PI: 6.3865
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00586g11030.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like73.62.9e-23208257151
                   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                               kpr++W+ eLH++Fv av+qL G e+A+Pk+il+lm+v+ L++e+v+SHLQ
  Peinf101Scf00586g11030.1 208 KPRVVWSIELHRKFVAAVNQL-GLERAVPKRILDLMNVEKLSRENVASHLQ 257
                               79*******************.***************************** PP
2Response_reg79.51.1e-26261341109
                               EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTH CS
              Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgee 83 
                               vl vdD+p+ ++ll  +l+k +y +v+++++++ al++l+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++a+g++
  Peinf101Scf00586g11030.1  26 VLAVDDDPICLKLLDGLLRKCQY-QVTTTSQARTALKMLRENRdrFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGDS 108
                               799********************.***************999889*******************87754.558************ PP

                               HHHHHHHHTTESEEEESS--HHHHHH CS
              Response_reg  84 edalealkaGakdflsKpfdpeelvk 109
                                ++ + ++ Ga d+l Kp+  eel +
  Peinf101Scf00586g11030.1 109 RLVMKGIDHGACDYLLKPVRLEELKN 134
                               ***********************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0363923.1E-1501710IPR017053Response regulator B-type, plant
SuperFamilySSF521726.4E-3623150IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23002.4E-4323157No hitNo description
SMARTSM004481.1E-3224136IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011043.99425140IPR001789Signal transduction response regulator, receiver domain
PfamPF000723.7E-2426134IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.83E-2827140No hitNo description
Gene3DG3DSA:1.10.10.601.1E-22205257IPR009057Homeodomain-like
SuperFamilySSF466894.48E-14206258IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-20208258IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0009414Biological Processresponse to water deprivation
GO:0010082Biological Processregulation of root meristem growth
GO:0010380Biological Processregulation of chlorophyll biosynthetic process
GO:0031537Biological Processregulation of anthocyanin metabolic process
GO:0048367Biological Processshoot system development
GO:0080022Biological Processprimary root development
GO:0080036Biological Processregulation of cytokinin-activated signaling pathway
GO:0080113Biological Processregulation of seed growth
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 712 aa     Download sequence    Send to blast
MTVEEIRGNM GGESDNFDNF PVGMRVLAVD DDPICLKLLD GLLRKCQYQV TTTSQARTAL  60
KMLRENRDRF DLVISDVHMP DMDGFKLLEL VGLEMDLPVI MLSANGDSRL VMKGIDHGAC  120
DYLLKPVRLE ELKNIWQHVI RKKKVHSKKQ NKSNEQDIAQ QGSGESGKGP QLLDNADQNG  180
KLNKKRKDEE YESDENGNDN EDPAAQKKPR VVWSIELHRK FVAAVNQLGL ERAVPKRILD  240
LMNVEKLSRE NVASHLQALI FPCSLSVSQK YRLYLKRISS EATQQANMVA ARDSAYMRMG  300
SLDGLGAFRT MAGSGRFGQA SLSSCASGGR FGRLNSPAGI GLRNLASSPQ LQPHHGQNLS  360
NSINTLTKSS PNVLLAGQNA SLFQGLPASL ELDQLQQSNC ATNMGQLNPL DDSGLLTGAS  420
TFPDSRSVVG ISNGSLSGIS NNPILLQGNS QQPLMGGGIG NQHSITSFSS ESFNTGVSGS  480
SNFLDRGGCN ENWQNSIQPL NFQSSSLPLN EPFSNSHFPQ DRVRDNNTSA GPQLQNNPVG  540
FSSSTIVSLP FEASRGETQC RDSFGGAIQI MNQAPCQRLQ DQKHNYSRNL NNIFGSSSSQ  600
VSSNGGVAFL TNSMDQNNDM FCRRVDTSLS GRSNGGSSAL MQHNESENLT LNSRTRTNED  660
YLLETTKQQV GFLPQDYGSL DDLTSAMKRE QDGAMLVGGE FGFDAYSFGS GL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A6e-24205279264ARR10-B
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006350077.10.0PREDICTED: two-component response regulator ORR24-like
TrEMBLM1AD550.0M1AD55_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000202330.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22582458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-125response regulator 12