PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00577g02007.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | ERF | ||||||||
Protein Properties | Length: 130aa MW: 14473 Da PI: 7.9411 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 45.1 | 2.5e-14 | 32 | 75 | 2 | 49 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaa 49 +y+GVr ++ +g+++AeIrdp + +++++lg+ + ++eAaka++ a Peinf101Scf00577g02007.1 32 HYSGVRKRP-WGKFAAEIRDPGD---KTHVWLGTIDMPDEAAKAYDTA 75 69*******.**********944...5*******************87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 17.82 | 32 | 92 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 6.82E-17 | 32 | 80 | No hit | No description |
SuperFamily | SSF54171 | 7.85E-14 | 32 | 83 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 7.8E-9 | 32 | 75 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 6.0E-21 | 32 | 82 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 4.3E-17 | 32 | 94 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.9E-7 | 33 | 44 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.9E-7 | 55 | 71 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 130 aa Download sequence Send to blast |
MPHGTAEGKR QVDGGMVVVT AAKRGRSSDE VHYSGVRKRP WGKFAAEIRD PGDKTHVWLG 60 TIDMPDEAAK AYDTATRLFR RGDQTADDAD FEHEQLSPDE RGSKYFRIWF LAGVVKGFHG 120 SNSQNHRGAD |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Acts as a transcriptional inhibitor and may regulate other AtERFs (By similarity). {ECO:0000250, ECO:0000269|PubMed:11487705}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009769627.1 | 1e-23 | PREDICTED: ethylene-responsive transcription factor 8-like | ||||
Refseq | XP_016510115.1 | 1e-23 | PREDICTED: ethylene-responsive transcription factor 8-like | ||||
Swissprot | Q9FE67 | 4e-21 | ERF80_ARATH; Ethylene-responsive transcription factor 9 | ||||
TrEMBL | A0A1S4D9J6 | 3e-22 | A0A1S4D9J6_TOBAC; ethylene-responsive transcription factor 8-like | ||||
TrEMBL | A0A1U7VP00 | 3e-22 | A0A1U7VP00_NICSY; ethylene-responsive transcription factor 8-like | ||||
TrEMBL | R4WAQ7 | 3e-22 | R4WAQ7_TOBAC; Ethylene response factor #230 | ||||
STRING | XP_009769627.1 | 5e-23 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 2e-23 | erf domain protein 9 |
Publications ? help Back to Top | |||
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