PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00559g22029.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 286aa    MW: 31807 Da    PI: 5.0974
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00559g22029.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.32.3e-102859132
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg 32
                              rg W++eEde+lv+ ++ +G g+W+++++  g
  Peinf101Scf00559g22029.1 28 RGLWSPEEDEKLVRHITTHGHGCWSSVPKLAG 59
                              788**************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.9E-141958IPR009057Homeodomain-like
SuperFamilySSF466891.64E-82265IPR009057Homeodomain-like
PROSITE profilePS5129410.3772372IPR017930Myb domain
SMARTSM007170.00512792IPR001005SANT/Myb domain
PfamPF002491.7E-72859IPR001005SANT/Myb domain
CDDcd001676.89E-63159No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MKTCAVRDSD EKDKGMGHHC CSKQKVKRGL WSPEEDEKLV RHITTHGHGC WSSVPKLAGL  60
DPNTHNLLST HQNKNNKTNN SSKTKSYHQD STSVFTIDTS TNKEVISMDI KATLAALPPF  120
LHSNNNTSST YNFTTPIVPI IEYQNPSTFT LSERNNNGST TTQHSMLDFA SNTSMNSTTN  180
NVSSSTLTPL GFGYINENCM WTGTGLEPTT LNPATDGTEE MQVQLQGEQF PIQTKFCDQE  240
DVYKVNQTVE NTFDNSNFDF DFVDSALVPC GLYNSVNSMD QLSWDC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF4779566e-38AF477956.1 Capsicum annuum transcription factor Myb mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009589329.14e-91PREDICTED: transcription factor MYB86-like isoform X1
RefseqXP_009589330.12e-91PREDICTED: transcription factor MYB86-like isoform X2
TrEMBLA0A1S3ZUN82e-88A0A1S3ZUN8_TOBAC; myb-related protein 330-like isoform X2
STRINGXP_009589329.12e-90(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12720.11e-21myb domain protein 67