PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00500g08031.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 264aa    MW: 28819.9 Da    PI: 4.2767
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00500g08031.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.11.3e-101445132
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg 32
                              +g+WT+eEd +lv +++++G+g+W++++   g
  Peinf101Scf00500g08031.1 14 KGPWTPEEDIILVSYIQEHGPGNWRAVPTNTG 45
                              79*************************98766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.5E-12543IPR009057Homeodomain-like
SuperFamilySSF466892.58E-9846IPR009057Homeodomain-like
PROSITE profilePS5129413.129955IPR017930Myb domain
SMARTSM007170.00111353IPR001005SANT/Myb domain
PfamPF002495.7E-91445IPR001005SANT/Myb domain
CDDcd001674.57E-61640No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MGRPPCCDKI GVKKGPWTPE EDIILVSYIQ EHGPGNWRAV PTNTGQWERR LQTDIHMAKQ  60
ALCEALSLDT PSNVDSPNNN NNPTPKILPV DEQPVQTSTT YASSAENIAK LLENWMKNSP  120
KSSESRSSSK TTQMSSLNNL SIGAVSSSSP SEGTRNVLDS VFSFNSSNNS DVSQSMSIDE  180
GGNFTPENNN ATIFQVESKP IDLPNFKEEN GIFQQVSKPN VETQQVPLTL LEKWLLDDAN  240
AQAAQEELMG IGMGMTLGET ADLF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754424e-39HG975442.1 Solanum pennellii chromosome ch03, complete genome.
GenBankHG9755154e-39HG975515.1 Solanum lycopersicum chromosome ch03, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009760429.17e-87PREDICTED: myb-related protein 306-like
TrEMBLA0A2G3AUQ91e-86A0A2G3AUQ9_CAPCH; Myb-related protein
STRINGXP_009760429.13e-86(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.15e-29myb domain protein 60