PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00500g06037.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

bHLH

Protein Properties

Length: 401aa MW: 44834 Da PI: 9.8951

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00500g06037.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.8	7.9e-13	235	282	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +n+ +rRRdriN+++ +L++++P+a K +Ka++L ++++Y+k Lq Peinf101Scf00500g06037.1 235 RRKNMKQKRRRDRINEKLKTLQKMVPNA-----SKTDKASMLDEVIKYLKRLQ 282 346**********************9.....7****************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	16.406	232	281	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	4.40E-14	232	286	No hit	No description
Gene3D	G3DSA:4.10.280.10	1.1E-13	234	302	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	3.53E-15	234	305	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	3.5E-10	235	282	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	4.5E-13	238	287	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence Send to blast
MSLPTRNFWH QRQEQVTEGE EENRYPHVHN KQNPNHLVPV YALILTSTNI FLEFLLLLSL 60 LIENCKNTTN RIKSKYEVAE LTWEKGNLNM HRLGGIVLND QTKQTFGRAS DTLESIVHQA 120 TSNKQNYTPS NLKGGDQNQA NISTGNIATS SGQWRESSAV KQQTTAGLVK KRMRSDSDPQ 180 LYGSGRSVGV CSKNIVIDQQ TERSANCDCD RDNDTTMITW PCSLDESSRS FKKTRRKNMK 240 QKRRRDRINE KLKTLQKMVP NASKTDKASM LDEVIKYLKR LQAEVQLISS ARNMEYSQMM 300 MMQPHIQMPL LARMGMNSLG MAPGMLNMAA LARAATPHQS LTAPFIYPTS SIATSCPPFM 360 SPAFAMAPAV PNPPQASGDA SANKVDVAPS ATNSFPFNDP Y

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence Send to blast

MSLPTRNFWH QRQEQVTEGE EENRYPHVHN KQNPNHLVPV YALILTSTNI FLEFLLLLSL  60
LIENCKNTTN RIKSKYEVAE LTWEKGNLNM HRLGGIVLND QTKQTFGRAS DTLESIVHQA  120
TSNKQNYTPS NLKGGDQNQA NISTGNIATS SGQWRESSAV KQQTTAGLVK KRMRSDSDPQ  180
LYGSGRSVGV CSKNIVIDQQ TERSANCDCD RDNDTTMITW PCSLDESSRS FKKTRRKNMK  240
QKRRRDRINE KLKTLQKMVP NASKTDKASM LDEVIKYLKR LQAEVQLISS ARNMEYSQMM  300
MMQPHIQMPL LARMGMNSLG MAPGMLNMAA LARAATPHQS LTAPFIYPTS SIATSCPPFM  360
SPAFAMAPAV PNPPQASGDA SANKVDVAPS ATNSFPFNDP Y

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	234	244	RRKNMKQKRRR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009801833.1	1e-134	PREDICTED: transcription factor PIF7
TrEMBL	A0A1J6IES1	1e-135	A0A1J6IES1_NICAT; Transcription factor une10
STRING	XP_009801833.1	1e-134	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5437	17	32

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	5e-28	bHLH family protein