PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00491g05013.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | ERF | ||||||||
Protein Properties | Length: 238aa MW: 25447.2 Da PI: 5.8128 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.6 | 2.7e-17 | 27 | 77 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr ++ +g++v+eIr p ++++r++lg++ t+e Aa+a++aa ++l+g Peinf101Scf00491g05013.1 27 KKYKGVRMRS-WGSYVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 77 59*****998.**********9...336*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.14E-17 | 27 | 87 | No hit | No description |
Pfam | PF00847 | 2.5E-10 | 28 | 77 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 4.7E-27 | 28 | 87 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.48E-17 | 28 | 87 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 1.6E-30 | 28 | 91 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 20.745 | 28 | 87 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 7.0E-8 | 29 | 40 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 7.0E-8 | 51 | 67 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009751 | Biological Process | response to salicylic acid | ||||
GO:0009753 | Biological Process | response to jasmonic acid | ||||
GO:0034605 | Biological Process | cellular response to heat | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0071497 | Biological Process | cellular response to freezing | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence Send to blast |
MVKTEQKTLP ESSKTMALSS SSNNMKKKYK GVRMRSWGSY VSEIRAPNQK TRIWLGSYST 60 PEAAARAYDA ALLCLKGPSA SSNLNFPCNS SFYHHLTHPS DHTLSPKAIQ RVAAAAAAVV 120 EGGGNGSLVA AAAAAVVEGG GNGSSASHDN PISPSPPLSS TSTSSSPLSH GDQDDLSILD 180 YTFDHCVEET GVSMIGQWYN FDSPKYNDML HGTIFFDPPS MEDVYEEGAA DIPLWSFF |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00156 | DAP | Transfer from AT1G21910 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | FJ228457 | 5e-44 | FJ228457.1 Glycine max AP2 domain-containing transcription factor 5 (AP2-5) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009592101.1 | 4e-72 | PREDICTED: ethylene-responsive transcription factor ERF014-like | ||||
Refseq | XP_016460968.1 | 5e-72 | PREDICTED: ethylene-responsive transcription factor ERF014-like | ||||
TrEMBL | A0A2G3CLK5 | 4e-79 | A0A2G3CLK5_CAPCH; Ethylene-responsive transcription factor | ||||
STRING | XP_009592101.1 | 2e-71 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6177 | 24 | 35 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21910.1 | 2e-28 | ERF family protein |