PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00468g09008.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 327aa    MW: 37179.8 Da    PI: 6.8014
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00468g09008.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.31.6e-14154200354
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                               + h  +Er+RR+r+ ++f +L +l+P +     kKl+Ka+iL  A++YIk+L
  Peinf101Scf00468g09008.1 154 QDHVLAERKRRERLTQSFITLSSLIPDL-----KKLDKASILGDAIKYIKQL 200
                               56999***********************.....9*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.075151200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.4E-12154200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.5E-17155218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.75E-17156219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.46E-13156205No hitNo description
SMARTSM003535.1E-16157206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MNDLQYIDHY QTMNPFDEFT YNNNPYSSYT YNNVQSSQVA EIFEEKPVFL SSRIETHQNT  60
SNFSSPSPNS SPSVISFSNS PTATSTPAQK YFENLNTPIK TEVPSGTTIN FSPSSISLDS  120
DFDDSQHLIQ ALGFGAGDFS HEKKNYSRTP LQAQDHVLAE RKRRERLTQS FITLSSLIPD  180
LKKLDKASIL GDAIKYIKQL AEQVKSLEEQ TKKCNEEQVV AVKRARIQSS YDNSNSTSTE  240
KSVPEIEVRV SDGNILIRIY CKKQARLMKE IFSQLEKFHL TIISSSVIPF GYTNNHITII  300
AQMDHQLSIM KEEHVVNKIR ETIMKLI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1159164ERKRRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006357745.11e-142PREDICTED: transcription factor bHLH18-like
TrEMBLA0A1U8G0M31e-139A0A1U8G0M3_CAPAN; transcription factor bHLH18-like
STRINGPGSC0003DMT4000786991e-134(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45081443
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.13e-44bHLH family protein