PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00468g08013.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 336aa    MW: 38298.3 Da    PI: 6.324
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00468g08013.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.83.8e-13153199455
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                h ++Er+RR+++ ++f eL  +lP +     kK++Ka+iLe+A++++k+L+
  Peinf101Scf00468g08013.1 153 DHIIAERKRREKLSQRFVELSAVLPGL-----KKVDKASILEQAIKHVKELE 199
                               699************************.....9****************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.04149198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-10153199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.2E-16153217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.45E-16154214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.17E-12154203No hitNo description
SMARTSM003531.3E-13155204IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MDSSSLRWFP RMGEKLDDFT TQKSTVSEDQ ETRELSLSPN SHASSSYFNQ ESKRKVSKID  60
FSLLTPLENC PIGSKRPSNQ PTMNNDIKSS SSPYLLSFSN VNSVPTSCKV EAVDEVYNLC  120
DSEQNFFPYL KTKSCYDQKD NPKKRIPSVD HQDHIIAERK RREKLSQRFV ELSAVLPGLK  180
KVDKASILEQ AIKHVKELEE KVQSLEEQEK TTRSLQESVM FVNKSQLEED ENYSSSDENN  240
SHGSISDDIS ADIEVRVSDK NVLIRITCAK RTAFLLKIYN EIEKLHLTIV NSCMMPFGKH  300
AIDVTIVAEM DDSFCMNLKD LVKHVRMVTG RLLNQA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1142161KKRIPSVDHQDHIIAERKRR
2157162ERKRRE
3158163RKRREK
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By ethylene (ACC) and jasmonic acid (JA) treatments. {ECO:0000269|PubMed:12679534}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009630109.11e-151PREDICTED: transcription factor bHLH18-like isoform X1
SwissprotQ9T0728e-47BH025_ARATH; Transcription factor bHLH25
TrEMBLA0A1S4DHT31e-149A0A1S4DHT3_TOBAC; transcription factor bHLH18-like
STRINGXP_009630109.11e-150(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA136021316
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.13e-46bHLH family protein