PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00459g04014.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | ERF | ||||||||
Protein Properties | Length: 211aa MW: 24175 Da PI: 7.5517 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 37.6 | 5.5e-12 | 42 | 90 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 s++kGV +g W A+I+ +kr++lg+f +++eAa a++ a+ +l+ge Peinf101Scf00459g04014.1 42 SRFKGVV-GQHNGHWGAQIYA------NKRIWLGTFKSEKEAAMAYDSAAIRLRGE 90 6899996.4448*******99......8**********99**************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 6.9E-7 | 42 | 90 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.5E-15 | 42 | 98 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 2.26E-24 | 42 | 99 | No hit | No description |
SMART | SM00380 | 7.4E-20 | 43 | 103 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 16.739 | 43 | 97 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 9.5E-18 | 43 | 97 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:2.40.330.10 | 3.7E-11 | 154 | 187 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 6.54E-8 | 157 | 187 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 1.08E-8 | 158 | 191 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence Send to blast |
MEEVISSTTT YVSENSYESS SNNQLHNKKR PRDEGKACNS SSRFKGVVGQ HNGHWGAQIY 60 ANKRIWLGTF KSEKEAAMAY DSAAIRLRGE DSHRNFPWTN LTLLEPSFQG QFSTEDILRM 120 IKDGSYPSKF DEFLKEKYEE NHPLNTIQGN EVFSCKQLFT KELTPSDVGK LNRLVIPKKF 180 ALKYFPQVIG KGDDCENQEF EDSELRSKKN A |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009771974.1 | 2e-91 | PREDICTED: AP2/ERF and B3 domain-containing transcription factor At1g51120 | ||||
Refseq | XP_016492322.1 | 2e-91 | PREDICTED: AP2/ERF and B3 domain-containing transcription factor At1g51120-like | ||||
Refseq | XP_019257867.1 | 3e-91 | PREDICTED: AP2/ERF and B3 domain-containing transcription factor At1g51120 | ||||
Swissprot | Q9C688 | 3e-59 | RAVL3_ARATH; AP2/ERF and B3 domain-containing transcription factor At1g51120 | ||||
TrEMBL | A0A1S4BTX1 | 5e-90 | A0A1S4BTX1_TOBAC; AP2/ERF and B3 domain-containing transcription factor At1g51120-like | ||||
TrEMBL | A0A1U7WBE0 | 5e-90 | A0A1U7WBE0_NICSY; AP2/ERF and B3 domain-containing transcription factor At1g51120 | ||||
STRING | XP_009771974.1 | 9e-91 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5252 | 23 | 39 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51120.1 | 3e-61 | RAV family protein |