PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00434g03016.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family C2H2
Protein Properties Length: 430aa    MW: 47207.8 Da    PI: 9.709
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00434g03016.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.55.6e-06198221123
                               EEETTTTEEESSHHHHHHHHHH.T CS
                   zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                               ++Cp Cg+ F  +++L+ H+++ H
  Peinf101Scf00434g03016.1 198 FSCPECGEIFMKPDHLEIHLSVrH 221
                               89******************9888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015710.097198226IPR007087Zinc finger, C2H2
PROSITE patternPS000280200221IPR007087Zinc finger, C2H2
SuperFamilySSF563992.3E-22223429No hitNo description
Gene3DG3DSA:3.90.228.108.1E-14225428IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    Send to blast
MAKSRRNSNI KHSKESSTSR HGRQQLQKEE KPHSWAVVRS LFTCKHLQAA RLEQQMLDGN  60
DKADNNNSST NNNNNNNNND DKKCKKMKYS CSGSNICSNT KVMQRPESSP SPPKTSSKSM  120
KVTLNELNAN GGSKAVISTS SLSSSSSSFS LQSATNSSSN SSAASRGIMP FRKLSGCYEC  180
RMVIDPALRD PSLRSTIFSC PECGEIFMKP DHLEIHLSVR HAVSELGPED TSRNIVEIIF  240
QSSWLNKKIP VCKIERILKV RNTARTISRF EEYRDAIKAK ATTLPKKQPR CIADGNELLR  300
FYCSTFMCSL GLNGSSNLCT VPDCNVCTII KNGFKVATTD GAACTKKGIL TTATSGKAHD  360
NTGVVSHDHE KRAMLVCRVI AGRVKKSMEG TLEGYDSIAG AAGVYSNLDE LYVFNPKAIL  420
PCFVVIYKGF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009587911.10.0PREDICTED: uncharacterized protein LOC104085555
TrEMBLA0A1S4CHY00.0A0A1S4CHY0_TOBAC; uncharacterized protein LOC107819234 isoform X1
STRINGXP_009587911.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA107231517
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.16e-95C2H2-like zinc finger protein