PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00381g12004.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 520aa    MW: 58475.4 Da    PI: 4.4301
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00381g12004.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.81e-07261309247
                               SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding   2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 
                                +W++eE++++ ++v   ++      W++ a +++  R+ k+++s+++++
  Peinf101Scf00381g12004.1 261 EKWSEEEEDIFHEVVFSNPPSlgkdFWNRLAIEFP-SRSKKELVSYYFNV 309
                               69**************988768888**********.***********996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.7E-4258321IPR009057Homeodomain-like
SMARTSM007173.6E-4259312IPR001005SANT/Myb domain
PfamPF002491.1E-6261309IPR001005SANT/Myb domain
PROSITE profilePS500905.993262310IPR017877Myb-like domain
CDDcd001675.86E-7262310No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 520 aa     Download sequence    Send to blast
MVQKRPYGDE DLYEVSSKQP RHVEPNSQLV SVLDFFPHES VVLKPYVSGG DEGYGKKRDS  60
DNVDKIPFHD QDIETCIDGC ASNSSWPTSS TSEEDIRFEV PFDTLRSPEY HPPYRTVVHP  120
REDYFSLLRN SPQKLVPIGP EFQAELPEWG AHGSKDKPIL DGTHETLNLP AQALESDFVD  180
HFGEGINLAG TCIIPMHNTE LPADNTEIAG AGRVKCSCED AGSMRCVRLH ILEAREKLKT  240
SLGEETFVRL GFYGTGEVVT EKWSEEEEDI FHEVVFSNPP SLGKDFWNRL AIEFPSRSKK  300
ELVSYYFNVF ILRKRAKQNR FDPSNIDSDN DEWQEIDDTV DDEDRMTDGD EDSVVESPEN  360
ENGVGRNYGY DRQAYDVATR EVYKPVGLGG RKAFTDLSAE FPDKLFDTYS RPKSNIQHLH  420
RGFSNEVGYY DGSCMPDAPG VAPEAPLGKT ANGRHWASDF ASMGGDNAHD FVLGPCSAKE  480
WDFGYLSCTK NEFDLLPTCT MIEEVFGDGA WSYKGRDGRA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1311317LRKRAKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019240931.10.0PREDICTED: uncharacterized protein LOC109220917
TrEMBLA0A1J6JTR30.0A0A1J6JTR3_NICAT; At-rich interactive domain-containing protein 2
STRINGXP_009616603.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15141625