PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00366g02022.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family C2H2
Protein Properties Length: 447aa    MW: 48652.4 Da    PI: 9.7684
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00366g02022.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.32.8e-05204226223
                               EETTTTEEESSHHHHHHHHHH.T CS
                   zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                                Cp Cg++F+  ++L++H+ + H
  Peinf101Scf00366g02022.1 204 ACPECGEVFPKIESLEHHQAVrH 226
                               6******************9888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.016203231IPR007087Zinc finger, C2H2
PROSITE patternPS000280203226IPR007087Zinc finger, C2H2
SuperFamilySSF563994.41E-24228443No hitNo description
Gene3DG3DSA:3.90.228.104.0E-12229443IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    Send to blast
MKKRGSSSTI VLLFHFLALL FMALLTFLPE TSETQKQPSK RRKKQQKQQK KQKEKQPSSW  60
DQFKNLLTCK QIENSTVHDP SSKNPSATAA SAGAYSKLSS CSSICTFRDV VHGNTRVVHR  120
ADNSPESSSL GQETRLLNKK KTSHHGPSSA SSSSRSLARS NGGASSTYST SSRGMQFRKL  180
SGCYECHMIV DPSRYPLPRS TICACPECGE VFPKIESLEH HQAVRHAVSE LGPEDSSRNI  240
VEIIFKSSWL KKDNPICKIE RILKVHNTKR TIQRFEDCRD AVKIHAVATG KKNPRCAADG  300
NELLRFYGSS ITCSLGARGS SSLCGSVPGC GVCTIIRHGF QGSKPSGVRT TASSGRAHDC  360
LGSNVAGRKA MLVCRVIAGR VKRLAEDAAA TPAKEEENCP GLSAPGSATY DSVVGYAGIY  420
SNLEELYVFN PRAILPCFVV IYDALES
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016568396.10.0PREDICTED: uncharacterized protein LOC107866896
TrEMBLA0A1U8GAQ60.0A0A1U8GAQ6_CAPAN; uncharacterized protein LOC107866896
STRINGXP_009616115.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA51952334
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-166C2H2-like zinc finger protein