PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00339g05027.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 295aa    MW: 32700.8 Da    PI: 10.2395
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00339g05027.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.11.5e-11103148247
                               SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                               ++WT+eE+  ++ +  +lG+g+W+ I++   + Rt  q+ s+ qky
  Peinf101Scf00339g05027.1 103 KPWTEEEHRSFLIGLDKLGKGDWRGISKNYVLSRTSTQVASHAQKY 148
                               58*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501588.5651227IPR001878Zinc finger, CCHC-type
PROSITE profilePS5129419.42497153IPR017930Myb domain
SuperFamilySSF466899.72E-1698153IPR009057Homeodomain-like
TIGRFAMsTIGR015572.2E-16100151IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.603.4E-10101150IPR009057Homeodomain-like
SMARTSM007175.5E-8101151IPR001005SANT/Myb domain
PfamPF002493.6E-9103148IPR001005SANT/Myb domain
CDDcd001674.34E-7104149No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MVSMSMTKKD ARKCSHCGHN GHNSRTCNNF KEVKLFGVRI DDNNNNNNNN HHQSGDNKMK  60
MKIGDEFIRR SKSLGNLESA ATNDLYHGID AGYFSDGPRK KGKPWTEEEH RSFLIGLDKL  120
GKGDWRGISK NYVLSRTSTQ VASHAQKYFN RISTSNEKRK RRPTSTSLPS IPNNVPEVQK  180
EASAPLEQLF ETCKIKGQAT KTTPSATCEK PPLSPMTSTK VTPTVSWYPV FNFPNPYQYA  240
HILNPEGATF TPYVARPSST GILSRQPPQV QSQAAIHAPP VTNKDGLNIS IGALG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009778274.11e-109PREDICTED: transcription factor MYB1R1-like
RefseqXP_015169157.11e-109PREDICTED: transcription factor MYB1R1-like
RefseqXP_016481927.11e-109PREDICTED: transcription factor MYB1R1-like
TrEMBLA0A1S4AZ371e-108A0A1S4AZ37_TOBAC; transcription factor MYB1R1-like
TrEMBLA0A1U7WU951e-108A0A1U7WU95_NICSY; transcription factor MYB1R1-like
STRINGXP_009778274.11e-109(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA117831823
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.19e-46MYB_related family protein