PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00318g13016.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | NAC | ||||||||
Protein Properties | Length: 378aa MW: 41978.6 Da PI: 4.5179 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 33.5 | 1.2e-10 | 28 | 118 | 20 | 128 |
NAM 20 kkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkk 104 + ++g++++ +vi++ + y+++P++Lp + +w f +++++ + k+g W a+g+ e+++ +++ g ++ Peinf101Scf00318g13016.1 28 DQIIRGSPIPD-DVIDD-NPYQYDPSNLP------DGSW-FLVRSAEI--------KESKHGSWIAKGEACEIFA-NSSICGWRT 94 55566666666.55554.78888888888......2234.33333332........234689*************.999****** PP NAM 105 tLvfykgrapkgektdWvmheyrl 128 t+ f++ +a+ +kt W+m+ey++ Peinf101Scf00318g13016.1 95 TFEFFEVQASIEQKTVWMMQEYKI 118 **********************86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 15.87 | 9 | 140 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 9.15E-15 | 17 | 138 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.4E-4 | 45 | 118 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 378 aa Download sequence Send to blast |
MCPLAPAAPP PGPISSYWTD GQICLSLDQI IRGSPIPDDV IDDNPYQYDP SNLPDGSWFL 60 VRSAEIKESK HGSWIAKGEA CEIFANSSIC GWRTTFEFFE VQASIEQKTV WMMQEYKITQ 120 KGEHDQTKSK ESALCRVFSC CNENLNSDMK PENKNDDLTL NLLSVFGSVT PHASSNHGER 180 SIGESQVKNQ IEGIGSSPGD KFRDFSDDDI VAELDCILRE DYIELDDLRD VSSHSSSSVN 240 SRRQSLASDE CFDFLELRDL DDEMNQALHG KGSTSNYNIM MCRIANDVFM QPAPLESLVG 300 GSGVAAKDTQ QVPANKAEFT SNPSPDQAVK RLKAEYRDEG SSSSSRATVS SSSSDEPGSR 360 REEKRKKQLK KFLCFMPF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 359 | 365 | RREEKRK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009758709.1 | 1e-153 | PREDICTED: NAC domain-containing protein 19-like | ||||
Refseq | XP_016452711.1 | 1e-153 | PREDICTED: NAC domain-containing protein 19-like | ||||
TrEMBL | A0A1S3YKE0 | 1e-152 | A0A1S3YKE0_TOBAC; NAC domain-containing protein 19-like | ||||
TrEMBL | A0A1U7V8W2 | 1e-152 | A0A1U7V8W2_NICSY; NAC domain-containing protein 19-like | ||||
STRING | XP_009758709.1 | 1e-153 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11207 | 21 | 23 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07680.2 | 2e-08 | NAC domain containing protein 80 |