PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00267g02009.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family C2H2
Protein Properties Length: 124aa    MW: 13985.2 Da    PI: 9.9094
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00267g02009.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.72e-055779123
                              EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                              y+C+ Cg+ F++   L  H+r+H
  Peinf101Scf00267g02009.1 57 YECSFCGEDFPTGQALGGHMRKH 79
                              99********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576673.21E-71579No hitNo description
PfamPF139125.9E-121741IPR007087Zinc finger, C2H2
SMARTSM003550.581739IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.8271744IPR007087Zinc finger, C2H2
PROSITE patternPS0002801939IPR007087Zinc finger, C2H2
PfamPF139125.3E-105781IPR007087Zinc finger, C2H2
SMARTSM003550.00695779IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.4295784IPR007087Zinc finger, C2H2
PROSITE patternPS0002805979IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    Send to blast
MSKKAIYLNT WLARKIFECK TCKKQFDSFQ ALGGHRASHK KPKFITASDF SIGTSNYECS  60
FCGEDFPTGQ ALGGHMRKHP DKLKKQKHKN CDDKLGSGKS LFLDLNLTPY ENDLMLGIIP  120
LKSI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18085DKLKKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0066021e-178AB006602.1 Petunia x hybrida mRNA for ZPT2-7, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019238702.16e-48PREDICTED: zinc finger protein ZAT11-like
SwissprotQ9SLD44e-25ZAT11_ARATH; Zinc finger protein ZAT11
TrEMBLO220872e-71O22087_PETHY; ZPT2-7
STRINGXP_009594752.11e-45(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36624150
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53600.11e-26C2H2 family protein