PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00264g08021.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

HD-ZIP

Protein Properties

Length: 763aa MW: 83866.9 Da PI: 5.6159

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00264g08021.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.9	9.8e-20	91	146	1	56
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t++q++e+e++F+++++p+ ++r+eL ++lgL+ qVk+WFqN+R++ k Peinf101Scf00264g08021.1 91 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELGRQLGLDPLQVKFWFQNKRTQTK 146 678899***********************************************998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.1E-21	75	142	IPR009057	Homeodomain-like
SuperFamily	SSF46689	9.19E-19	80	148	IPR009057	Homeodomain-like
PROSITE profile	PS50071	16.568	88	148	IPR001356	Homeobox domain
SMART	SM00389	9.7E-19	89	152	IPR001356	Homeobox domain
Pfam	PF00046	2.1E-17	91	146	IPR001356	Homeobox domain
CDD	cd00086	1.23E-18	91	149	No hit	No description
SuperFamily	SSF55961	2.2E-35	272	503	No hit	No description
PROSITE profile	PS50848	42.711	272	504	IPR002913	START domain
CDD	cd08875	7.14E-122	276	500	No hit	No description
SMART	SM00234	7.8E-57	281	501	IPR002913	START domain
Pfam	PF01852	1.6E-50	282	501	IPR002913	START domain
Gene3D	G3DSA:3.30.530.20	3.0E-5	377	470	IPR023393	START-like domain
SuperFamily	SSF55961	2.06E-21	521	746	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding
GO:0008289	Molecular Function	lipid binding

Sequence ? help Back to Top
Protein Sequence Length: 763 aa Download sequence Send to blast
MEMPAGTMQL PVNMIANDGN NVNFAPAAAG LAPVQSNGMM EGQHHSMDMA SYTSESEFML 60 DQELDRKSGS DNQEGKSGDD EQADANQRAK KKRYHRHTQH QIQEMEAFFK ECPHPDDKQR 120 KELGRQLGLD PLQVKFWFQN KRTQTKNHHE HNENALLRAE NEKFKAENVQ LREALNNAAL 180 CPTCRCPTNN LGEMSFAEHS LKLENDRLTE EVHRISAIAA KFVGKPVSTF NVYSPPVTPP 240 PFDLGVQPYS AQHNVIGDAY GNGGERIISG PTEAEKPFII ELAVAAMEEL IQMANMGEPL 300 WLPSIDSGSY FLNEDEYARI FPRGIGPKPD GFKTEASKET AVVIMNHINL VEIFMDVNHW 360 SSMFSNIVSK AVTLDVLSTG VAGNFNGALQ VIFAEFQVPS PQIPTRDCYF VRYCKRSVDG 420 IWAIVDVSLD HLRGNLTARC RRRPSGCLIQ EMPNGYSKVT WIEHIDADDT VIHDIYKPLV 480 NYGLAFGAKR WLAILDRQCE RLASAMATII PNNDIRNMVI STQEARKSTL KLTERMVISF 540 CSGASATTAH QWTTLSGSGL DSDVRIMTRK SIDDPGKPSG IVLSAATSFW LPICTERVFN 600 FLRDESTRSK WDILSNGGIV QEMAHIANGR ENGNCVSLLR VTSENSSQSN MLILQESSTD 660 PTGSFVVYAP VDVAAMNIVL GGGEPDYVAL LPSGFAILPD GPPGNSGITA GSGGSLLTVA 720 FQILVDSVPT AKLSLGSVAT VNNLIACTVS REGAVRTNWQ EIK

Sequence ? help Back to Top

Protein Sequence Length: 763 aa Download sequence Send to blast

MEMPAGTMQL PVNMIANDGN NVNFAPAAAG LAPVQSNGMM EGQHHSMDMA SYTSESEFML  60
DQELDRKSGS DNQEGKSGDD EQADANQRAK KKRYHRHTQH QIQEMEAFFK ECPHPDDKQR  120
KELGRQLGLD PLQVKFWFQN KRTQTKNHHE HNENALLRAE NEKFKAENVQ LREALNNAAL  180
CPTCRCPTNN LGEMSFAEHS LKLENDRLTE EVHRISAIAA KFVGKPVSTF NVYSPPVTPP  240
PFDLGVQPYS AQHNVIGDAY GNGGERIISG PTEAEKPFII ELAVAAMEEL IQMANMGEPL  300
WLPSIDSGSY FLNEDEYARI FPRGIGPKPD GFKTEASKET AVVIMNHINL VEIFMDVNHW  360
SSMFSNIVSK AVTLDVLSTG VAGNFNGALQ VIFAEFQVPS PQIPTRDCYF VRYCKRSVDG  420
IWAIVDVSLD HLRGNLTARC RRRPSGCLIQ EMPNGYSKVT WIEHIDADDT VIHDIYKPLV  480
NYGLAFGAKR WLAILDRQCE RLASAMATII PNNDIRNMVI STQEARKSTL KLTERMVISF  540
CSGASATTAH QWTTLSGSGL DSDVRIMTRK SIDDPGKPSG IVLSAATSFW LPICTERVFN  600
FLRDESTRSK WDILSNGGIV QEMAHIANGR ENGNCVSLLR VTSENSSQSN MLILQESSTD  660
PTGSFVVYAP VDVAAMNIVL GGGEPDYVAL LPSGFAILPD GPPGNSGITA GSGGSLLTVA  720
FQILVDSVPT AKLSLGSVAT VNNLIACTVS REGAVRTNWQ EIK

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009766038.1	0.0	PREDICTED: homeobox-leucine zipper protein HDG2-like
Refseq	XP_016447957.1	0.0	PREDICTED: homeobox-leucine zipper protein HDG2-like
Swissprot	Q94C37	0.0	HDG2_ARATH; Homeobox-leucine zipper protein HDG2
TrEMBL	A0A1S3Y7I3	0.0	A0A1S3Y7I3_TOBAC; homeobox-leucine zipper protein HDG2-like
TrEMBL	A0A1U7VI76	0.0	A0A1U7VI76_NICSY; homeobox-leucine zipper protein HDG2-like
STRING	XP_009766038.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA932	24	91

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G05230.4	0.0	homeodomain GLABROUS 2