PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00231g04012.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 335aa    MW: 37821.8 Da    PI: 7.2604
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00231g04012.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.84.6e-171488148
                              TSSS-HHHHHHHHHHHHHTTTT............................-HHHHHHHHTTTS-HHHHHHHHHHHT CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg............................tWktIartmgkgRtlkqcksrwqkyl 48
                              +g+WT+eEd++l  +++++G g                            +W++Ia ++  +Rt++++k++w+++l
  Peinf101Scf00231g04012.1 14 KGPWTPEEDQKLMACIEKHGCGswralpakavfveylimliygiycyhlyRWSAIATHLA-NRTDNEIKNYWNTHL 88
                              79**********************************************************.************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.426992IPR017930Myb domain
SuperFamilySSF466892.35E-141184IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.6E-191377IPR009057Homeodomain-like
SMARTSM007172.1E-121390IPR001005SANT/Myb domain
PfamPF002498.2E-81442IPR001005SANT/Myb domain
CDDcd001675.46E-111688No hitNo description
PfamPF002493.7E-66488IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.608.1E-578103IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.1E-5152169IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000902Biological Processcell morphogenesis
GO:0009651Biological Processresponse to salt stress
GO:0009723Biological Processresponse to ethylene
GO:0009733Biological Processresponse to auxin
GO:0009739Biological Processresponse to gibberellin
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0046686Biological Processresponse to cadmium ion
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MGRSPCCEKL GLKKGPWTPE EDQKLMACIE KHGCGSWRAL PAKAVFVEYL IMLIYGIYCY  60
HLYRWSAIAT HLANRTDNEI KNYWNTHLRK RLTKMGIDPI THKPKTNIFG SSQLSHMAQW  120
ENARLEAEAR LVRESKKQIS NNNIHDFGSL ANTRSAHHQL FNQRSRINNI VPLQAKVPPF  180
LDVLKVWQDS NWIKPKITKD TSSSSVLDSV LTSMNNGSFD SPTSTNNLFM APNNNIPGLV  240
DNSCLVNAGS FMENPEVEII TKEEVQTDQV QINDISSINY MSITDQSSGF PSFIQGFTHL  300
ENIVGSCEDN LEDNKYSYWN TILNSCTSPA GSPVF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009591172.11e-131PREDICTED: transcription factor MYB39-like
RefseqXP_016468968.11e-131PREDICTED: transcription factor MYB39-like
TrEMBLA0A1S3ZXA01e-129A0A1S3ZXA0_TOBAC; transcription factor MYB39-like
STRINGXP_009591172.11e-130(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15310.12e-58myb domain protein 16