PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00229g09005.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

C2H2

Protein Properties

Length: 295aa MW: 33180.2 Da PI: 5.6399

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00229g09005.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17	1.7e-05	136	158	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C k+F+++ L +H H Peinf101Scf00229g09005.1 136 YQCGICYKMFKTSQALGSHKTIH 158 9******************9887 PP
2	zf-C2H2	15.4	5.2e-05	200	222	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp Cgk+F++ L H r+H Peinf101Scf00229g09005.1 200 HECPFCGKRFKSGQALGGHKRSH 222 79******************999 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:3.30.160.60	8.6E-4	134	160	IPR013087	Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamily	SSF57667	1.51E-9	134	158	No hit	No description
SMART	SM00355	0.19	136	158	IPR015880	Zinc finger, C2H2-like
PROSITE profile	PS50157	10.616	136	163	IPR007087	Zinc finger, C2H2
Pfam	PF13912	9.3E-5	136	158	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	138	158	IPR007087	Zinc finger, C2H2
SuperFamily	SSF57667	1.51E-9	195	222	No hit	No description
Gene3D	G3DSA:3.30.160.60	1.2E-4	197	222	IPR013087	Zinc finger C2H2-type/integrase DNA-binding domain
SMART	SM00355	0.0065	200	222	IPR015880	Zinc finger, C2H2-like
PROSITE profile	PS50157	10.429	200	222	IPR007087	Zinc finger, C2H2
Pfam	PF13912	1.3E-11	200	223	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	202	222	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003676	Molecular Function	nucleic acid binding
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence Send to blast
MRSHLMTLPP KTPPLNQDSG ESSTLSLCSS EENQQVLELQ NKDNVLYGLR ENPKKSYRMI 60 DPEFLEDRES ETESTKTGKR SKRSRKMVAS DEKMKPLSLF SNCSSDEDIA MCLMMLSRDV 120 WKNSSETLEV SNLRKYQCGI CYKMFKTSQA LGSHKTIHKN KNKNLSTCIE EQNIKEDNAM 180 DEASHEHTEF GKVVVDSKLH ECPFCGKRFK SGQALGGHKR SHLIIMSSST TAGSCSSKLG 240 DSLMEYSNSV KNSGSASELF IDLNMPAPME DEDFSQQPDF SAVSDADFQL DQEHE

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009591197.1	1e-102	PREDICTED: zinc finger protein ZAT1-like
TrEMBL	A0A1S4BJI0	1e-97	A0A1S4BJI0_TOBAC; zinc finger protein ZAT1-like
STRING	XP_009591197.1	1e-101	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1095	24	80

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	2e-28	C2H2-like zinc finger protein