PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00208g02020.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 294aa    MW: 32873.5 Da    PI: 4.8956
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00208g02020.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.14.9e-06184215437
                               HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS- CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskK 37 
                               ++  rEr RR+++N++f+eL ++l + +   p++K
  Peinf101Scf00208g02020.1 184 SKACRERVRREKLNERFSELCSVLEPgR---PAEK 215
                               6789****************99999877...5555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.49E-4178203No hitNo description
SuperFamilySSF474595.67E-5185213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MNQLDSIPHN NWDDFIDFNT VLNWNDHTHN QSMDRDSPAP ASTYPSVNGE YRGCYMPSYN  60
GGFGGGEYGK QVMVDHLSHT VKDSLHPYGF GSSNQTDPIG APISNGNGKP CDLGEDSEGI  120
FSSDGPVFPP PNEMLEEGFS LPEWRRTVTT LDAPISSATF QEECVETECL RKRARNESCS  180
KQGSKACRER VRREKLNERF SELCSVLEPG RPAEKNELRE EKLTLKADKE RMEQELKAMA  240
APPASFIPPH PAAYQPAVNK MAVFPSYGYV PMWQYLPPST RDTSQDHELR PPAA
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00102PBMTransfer from AT4G14410Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9755212e-81HG975521.1 Solanum lycopersicum chromosome ch09, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009775135.13e-84PREDICTED: transcription factor bHLH104 isoform X1
RefseqXP_016457771.13e-84PREDICTED: transcription factor bHLH104-like isoform X1
TrEMBLA0A1S3YZM28e-83A0A1S3YZM2_TOBAC; transcription factor bHLH104-like isoform X1
TrEMBLA0A1U7WLJ48e-83A0A1U7WLJ4_NICSY; transcription factor bHLH104 isoform X1
STRINGXP_009775135.11e-83(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA47622132
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14410.26e-52bHLH family protein