PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00181g11014.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family B3
Protein Properties Length: 612aa    MW: 68245.6 Da    PI: 8.2633
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00181g11014.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.58.8e-17281051699
                               EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                        B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                                 +p kf+++++g    s t  l  +s +sW v l   +++++ ++ +GW +Fvk++ L+ gD++vF++dg+  f   v++f++
  Peinf101Scf00181g11014.1  28 QKIPSKFIKHMEGR--ASGTAFLVGPSENSWPVDL--IQQDDGLFFHNGWASFVKDHCLERGDSLVFRYDGDLHF--AVQAFDE 105
                               479*****777777..4459***************..99999***************************997666..8888875 PP
2B352.96.6e-17274368198
                               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
                        B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                               f kv+++ + + s  l +p +fa+eh   +++++++ l +++g++W+++ i  ++ + ++++ +GW +Fv++n+++ gD+++F+l
  Peinf101Scf00181g11014.1 274 FTKVMKRFNIGGSYTLNIPYQFATEHL--PKCKVKILLHNLKGKTWTINSIPtTRVQTSHTFCGGWLSFVRDNNIDLGDICIFEL 356
                               778888888888899***********6..34999****************77566666699***********************9 PP

                               -SSSEE..EEEEE- CS
                        B3  85 dgrsefelvvkvfr 98 
                               +++ e  l+v+v+r
  Peinf101Scf00181g11014.1 357 VRKCE--LRVHVLR 368
                               98554..5888877 PP
3B350.15e-16493586197
                               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE CS
                        B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkl 84 
                               f+ ++++ +v+ s  l +p +f  eh   +++ ++++l++++g+ W+v+ i + k ++ +++ +GW+ Fv++n+++ gD+++F+l
  Peinf101Scf00181g11014.1 493 FVRIMKKFNVSGSYTLKVPYQFSMEHL--PNCRTEIVLRNLNGECWTVNSIPTVKVQTlHTFCGGWSAFVRDNDIQMGDICIFEL 575
                               556677778888999*******99996..45889****************99888888999***********************9 PP

                               -SSSEE..EEEEE CS
                        B3  85 dgrsefelvvkvf 97 
                               +g  + el+v+++
  Peinf101Scf00181g11014.1 576 VG--KYELRVHIC 586
                               98..555688887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086312.71713106IPR003340B3 DNA binding domain
SMARTSM010192.8E-1016106IPR003340B3 DNA binding domain
SuperFamilySSF1019361.06E-1928108IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.102.3E-1928107IPR015300DNA-binding pseudobarrel domain
PfamPF023623.8E-1429105IPR003340B3 DNA binding domain
CDDcd100171.66E-1530104No hitNo description
Gene3DG3DSA:2.40.330.101.3E-23266368IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019364.71E-24267369IPR015300DNA-binding pseudobarrel domain
CDDcd100176.73E-20272368No hitNo description
PROSITE profilePS5086313.775274370IPR003340B3 DNA binding domain
PfamPF023622.0E-14274368IPR003340B3 DNA binding domain
SMARTSM010197.8E-15274370IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.6E-23485586IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019364.32E-25486586IPR015300DNA-binding pseudobarrel domain
CDDcd100178.68E-21491586No hitNo description
PROSITE profilePS5086312.872493589IPR003340B3 DNA binding domain
PfamPF023621.1E-13493586IPR003340B3 DNA binding domain
SMARTSM010193.8E-12493589IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 612 aa     Download sequence    Send to blast
MNHSVLFVEK TRLINSCKIL DYLNSLVQKI PSKFIKHMEG RASGTAFLVG PSENSWPVDL  60
IQQDDGLFFH NGWASFVKDH CLERGDSLVF RYDGDLHFAV QAFDESSCEK EAAFNADCSQ  120
GATNLYNLAL RKRDRGNSAL LECIIEGVPK KMRSTQVPSD CTSNQDTHGI ASGKDGCMPE  180
EVVSSNRRSY DSSFPNEMEN AGNASIDTVT IAVPSTDIVC YNPGEWLRFL FLAVRFSSLR  240
KVKAGNGTSE EDTRLSAQEA EKVARSFTSS FPSFTKVMKR FNIGGSYTLN IPYQFATEHL  300
PKCKVKILLH NLKGKTWTIN SIPTTRVQTS HTFCGGWLSF VRDNNIDLGD ICIFELVRKC  360
ELRVHVLRVE KEENDYSKVV HEGLATDYAA TPAKISGCKS HKVGANSIHC LQQVAKATYD  420
KKGSGHDKEK HGTMMKSHQL HCQSKITSGD SVVRKPTSSQ DKQGSFTKSC MSMKSVPEEK  480
LAAESFNSNF PHFVRIMKKF NVSGSYTLKV PYQFSMEHLP NCRTEIVLRN LNGECWTVNS  540
IPTVKVQTLH TFCGGWSAFV RDNDIQMGDI CIFELVGKYE LRVHICAIGK KGLDYRNGIT  600
SNESAILASL TS
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCU9145241e-142CU914524.3 S.lycopersicum DNA sequence from clone LE_HBa-107D6 on chromosome 4, complete sequence.
GenBankHG9755161e-142HG975516.1 Solanum lycopersicum chromosome ch04, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016568698.10.0PREDICTED: B3 domain-containing protein Os01g0723500-like isoform X1
RefseqXP_016568699.10.0PREDICTED: B3 domain-containing protein Os01g0723500-like isoform X1
TrEMBLA0A1U8GKT10.0A0A1U8GKT1_CAPAN; B3 domain-containing protein Os01g0723500-like isoform X1
STRINGXP_009781392.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA98202126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.16e-16B3 family protein