PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00176g06007.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 194aa    MW: 21781.1 Da    PI: 6.2727
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00176g06007.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.14.6e-18114164255
                       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                y+GVr+++ +g+++AeIrdps+ g   r++lg+f+t  +Aa+a++ a+ +++g
  Peinf101Scf00176g06007.1 114 NYRGVRRRP-WGKYAAEIRDPSKKG--SRIWLGTFDTDMDAARAYDCAAFNMRG 164
                               59*******.**********97744..**********88*************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.51E-31113172No hitNo description
SuperFamilySSF541711.05E-22114174IPR016177DNA-binding domain
PROSITE profilePS5103224.342114172IPR001471AP2/ERF domain
SMARTSM003806.8E-37114178IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.1E-32114173IPR001471AP2/ERF domain
PfamPF008471.2E-12114164IPR001471AP2/ERF domain
PRINTSPR003676.9E-13115126IPR001471AP2/ERF domain
PRINTSPR003676.9E-13154174IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
MTTSEEGLTL DLIRQHLLED FTTTESFINS LNSCFSDTIP PVFVKTEQPS TSDNNSPSYS  60
PHSPVSLYFT DFPELFNIKS DILDSPISDS SVSSNTIISS DTTSSNEYDN MKKNYRGVRR  120
RPWGKYAAEI RDPSKKGSRI WLGTFDTDMD AARAYDCAAF NMRGRKAILN FPMDAGKSGA  180
PANIGRKRRR DHEN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-28113173161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1185189RKRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ2596040.0HQ259604.1 Petunia x hybrida ethylene-responsive-element-binding factor 10 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019257925.15e-98PREDICTED: ethylene-responsive transcription factor ERF106-like
TrEMBLE3VVR91e-126E3VVR9_PETHY; Ethylene-responsive-element-binding factor 10
STRINGXP_009597659.13e-97(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.16e-46ERF family protein