PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00175g01038.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family GRF
Protein Properties Length: 447aa    MW: 49141.8 Da    PI: 8.6515
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00175g01038.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC69.34.8e-22136179145
                       WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                               d+epgrC+RtDGKkWRC+r+v++g+k+C +H+hrg  rsrk++e+
  Peinf101Scf00175g01038.1 136 DPEPGRCKRTDGKKWRCKRDVIPGQKYCGHHMHRG-RRSRKPVEA 179
                               79*********************************.688998886 PP
2WRC58.41.2e-18341375640
                       WRC   6 rCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsr 40 
                               rCrR+DGKkWRCs++v++ +k+CE H+hrg +r++
  Peinf101Scf00175g01038.1 341 RCRRSDGKKWRCSKNVVPHQKYCETHMHRGAKRTK 375
                               9*****************************99986 PP
3QLQ42.91.5e-154882337
                       QLQ  3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37
                              FTaaQ+++L  Q+ ++Ky+++++PvP +L + i++
  Peinf101Scf00175g01038.1 48 FTAAQFHELQLQAVIFKYIISGLPVPFHLFFTIWN 82
                              *****************************999997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009512.0E-54682IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166616.7064782IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088803.3E-114881IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166724.028136180IPR014977WRC domain
PfamPF088792.6E-18137176IPR014977WRC domain
PROSITE profilePS5166720.154336380IPR014977WRC domain
PfamPF088793.6E-16341375IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    Send to blast
METVVAMNRK GEEDERKKKE GSPPCIKLSL GSGVSKEEEK GENAKCVFTA AQFHELQLQA  60
VIFKYIISGL PVPFHLFFTI WNSVSSSLAS ADDSFTQWRA WLHEYLELLK HCHTDLILFI  120
WALVSVGRFD YASMMDPEPG RCKRTDGKKW RCKRDVIPGQ KYCGHHMHRG RRSRKPVEAS  180
ECVMKSDDMS ITSKSSKLYA SSDDPGSSCA PASTKSASLS SSSRNNQNNS IGDSSAKPRT  240
VNFCNSSGKQ DNYMACNRKN STTCQRTTPV ITGKDADSKN IDLNCISPSK TNQKQNYGDA  300
GNSGGLAHVF GTSAKPDLQY TTGSTNLNSD GNTCSETGLQ RCRRSDGKKW RCSKNVVPHQ  360
KYCETHMHRG AKRTKVASDS AVVVSSKPSS YRFCQAENDG SGRNLNTGLS ISTLPGPRNI  420
TEDDDSDSNS ISDATTITDE TPAFMSH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009800681.10.0PREDICTED: growth-regulating factor 9 isoform X1
RefseqXP_016473091.10.0PREDICTED: growth-regulating factor 9-like isoform X1
TrEMBLA0A1S4A9340.0A0A1S4A934_TOBAC; growth-regulating factor 9-like isoform X1
TrEMBLA0A1U7YFE30.0A0A1U7YFE3_NICSY; growth-regulating factor 9 isoform X1
STRINGXP_009800681.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA77981922
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45480.12e-28growth-regulating factor 9