PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00170g01002.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 273aa    MW: 30821.8 Da    PI: 6.603
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00170g01002.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.14.3e-18101151256
                       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                                y+GVr +  +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a ++++g+
  Peinf101Scf00170g01002.1 101 TYRGVRKRN-WGKWVCEIREPRK---KSRIWLGTYPTAEMAARAHDVASLAIKGH 151
                               69****887.**********843...6*********************9999886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.7E-31101158IPR001471AP2/ERF domain
PfamPF008472.2E-13101151IPR001471AP2/ERF domain
SMARTSM003808.6E-33101164IPR001471AP2/ERF domain
PROSITE profilePS5103223.288101158IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-21101159IPR016177DNA-binding domain
CDDcd000181.08E-30102160No hitNo description
PRINTSPR003671.4E-10102113IPR001471AP2/ERF domain
PRINTSPR003671.4E-10124140IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MKDQLEQINL GTLAQFQHDF SNFSSTTSTS FSSSNCRNSP STTTSSSSSS FHEINTKTQV  60
EYKSKKSSKK IQEFAHNGND HIVENENKRR SKNEGHDKHP TYRGVRKRNW GKWVCEIREP  120
RKKSRIWLGT YPTAEMAARA HDVASLAIKG HSAYLNFPYL ADQLPRPASN SPKDIQVAAA  180
KAAATTFPEE SCSGKEIESS LTELHSSCSS TNLSSENNQE FIDSPSTEND DTFFNLPDLS  240
INNMDQKDRI STWQQVGADV GFWFEEPFLW ESY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-17991591273Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009628141.11e-110PREDICTED: ethylene-responsive transcription factor ERF038-like
RefseqXP_016490268.11e-110PREDICTED: ethylene-responsive transcription factor ERF038-like
SwissprotQ8LBQ72e-56ERF34_ARATH; Ethylene-responsive transcription factor ERF034
TrEMBLA0A1S4BN001e-108A0A1S4BN00_TOBAC; ethylene-responsive transcription factor ERF038-like
STRINGXP_009628141.11e-109(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21224225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.12e-52ERF family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]