PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00152g01009.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family HD-ZIP
Protein Properties Length: 406aa    MW: 44395.2 Da    PI: 7.1302
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00152g01009.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.79.4e-19221275256
                               T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
                  Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                               rk+ +++keq   Lee F+++++++ ++++ LAk+l+L  rqV vWFqNrRa+ k
  Peinf101Scf00152g01009.1 221 RKKLRLSKEQSAYLEESFKEHHTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTK 275
                               778899***********************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.7E-18204275IPR009057Homeodomain-like
SuperFamilySSF466891.33E-18213278IPR009057Homeodomain-like
PROSITE profilePS5007117.362217277IPR001356Homeobox domain
SMARTSM003891.8E-16219281IPR001356Homeobox domain
CDDcd000866.14E-16221278No hitNo description
PfamPF000465.0E-16221275IPR001356Homeobox domain
PROSITE patternPS000270252275IPR017970Homeobox, conserved site
PfamPF021836.5E-11277311IPR003106Leucine zipper, homeobox-associated
SMARTSM003409.1E-26277320IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    Send to blast
MELGLSLGDT NNTATTTAAA SKSCFLSKNI NTSSSDHIQN HSCKKKRKGL GFCMALGINS  60
SGRVQEDDDD ETPEKSQEND DDDDLEDDRT SEEGRDNTSL KPVQLDLLPL VPVPRRNLPH  120
QPLHWSSSNG SSENGSSGNG GLPAARGFDV NRLPAAGTME EVSSPNSVAS SFQMDFGLLK  180
GFGNLIGNKR NSESAGVNDG GEPERASSRA SDEDENGLNT RKKLRLSKEQ SAYLEESFKE  240
HHTLNPKQKQ ALAKQLNLRP RQVEVWFQNR RARTKLKQTE VDCEYLKRCC ETLTEENRRL  300
HKELQELRAL KTSNPFYMQL PATTLTMCPS CERVASTTSA ATAPPITPTG TTTIATTSKA  360
PPTKTTTPTS TTTTTSDTIP KAIPFLSRPR FFPFTTTNNP NQSAAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1219225TRKKLRL
2269277RRARTKLKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009617361.10.0PREDICTED: homeobox-leucine zipper protein HOX11-like
RefseqXP_016500773.10.0PREDICTED: homeobox-leucine zipper protein HOX11-like
SwissprotP466658e-90HAT14_ARATH; Homeobox-leucine zipper protein HAT14
TrEMBLA0A1S4CHX70.0A0A1S4CHX7_TOBAC; homeobox-leucine zipper protein HOX11-like
STRINGXP_009617361.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29024186
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06710.18e-84homeobox from Arabidopsis thaliana