PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00146g07017.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

BES1

Protein Properties

Length: 740aa MW: 84076.6 Da PI: 6.4356

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00146g07017.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	160.5	1.1e-49	49	195	2	145
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagss 85 ++ rk+++kE+E++k+RER+RRai++++++GLR++Gn++lp+raD+n+Vl+AL+r+AGw v++DGttyr++ p+ +++ +g+ Peinf101Scf00146g07017.1 49 SGSRKEREKEKERTKLRERHRRAITSRMLSGLRQYGNFPLPVRADMNDVLAALARQAGWNVDPDGTTYRQSPPPPnINNNNIGTY 133 789******************************************************************999989999* PP DUF822 86 asaspesslq.sslkssalaspvesysaspksssfpspssldsislasa.asllpvlsvlsl 145 + +s+es+++ ssl++++++ v+ ++++p+ ++ +sp+s+dsi ++++ ++ +++s++s Peinf101Scf00146g07017.1 134 QVMSVESPVSgSSLRNCSTRVSVDCQHSVPRINECLSPASFDSIVVTESdVKVDKFTSTTSP 195 ******************************************999876444444444433 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.8E-50	50	191	IPR008540	BES1/BZR1 plant transcription factor, N-terminal
SuperFamily	SSF51445	4.92E-22	220	303	IPR017853	Glycoside hydrolase superfamily
Gene3D	G3DSA:3.20.20.80	4.2E-24	223	302	IPR013781	Glycoside hydrolase, catalytic domain
Pfam	PF01373	2.3E-9	247	303	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	5.1E-6	260	274	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	5.1E-6	281	299	IPR001554	Glycoside hydrolase, family 14
Gene3D	G3DSA:3.20.20.80	1.3E-137	379	733	IPR013781	Glycoside hydrolase, catalytic domain
Pfam	PF01373	9.2E-64	381	696	IPR001554	Glycoside hydrolase, family 14
SuperFamily	SSF51445	5.08E-127	381	734	IPR017853	Glycoside hydrolase superfamily

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0000272	Biological Process	polysaccharide catabolic process
GO:0016161	Molecular Function	beta-amylase activity

Sequence ? help Back to Top
Protein Sequence Length: 740 aa Download sequence Send to blast
MNHQQQQPDP DPQFPNRNED PNPNPQPQPR RPRGFAATNT AGSTNKSSSG SRKEREKEKE 60 RTKLRERHRR AITSRMLSGL RQYGNFPLPV RADMNDVLAA LARQAGWNVD PDGTTYRQSP 120 PPPNINNNNI GTYQVMSVES PVSGSSLRNC STRVSVDCQH SVPRINECLS PASFDSIVVT 180 ESDVKVDKFT STTSPMNSTE CLEAGQLMQE LHSGEHGSGF SGTEYVPVFV LLSSGLINNF 240 CQLMDPDGVK QELQQLKSLN IDGVVVNCWW GIVESWVPQK YEWSGYRELF NIIRDFKMKL 300 QVLKHSLNFG FPALSHSMSY SIMRLNSYKP SMLEMFHYIS TWKYYHPPSP PTPIPEGKVT 360 QHEENGLRMT QCFMGFCFLS TKVVMAFHEN GGSDTSGMFI SLPQWVLEIG KDNQDIFFTD 420 RQGRRNTECL SWGIDKERVL RGRTAIEVYF DVMRSFRTEF DDLFTEGLIS AVEIGLGASG 480 ELKYPSFSER MGWRYPGIGE FQCYDKYSLQ NLRKAATSRG HSFWAKGPDN AGYYNSKPHE 540 TGFFCERGDY DSYYGRFFLH WYRQVLIDHA DNVLSLASLA FEGIQIVVKI PAIYWWYRTS 600 SHAAELTAGY YNPTNQDGYS PVFEVLKKHS VTIKYICSGV QVPETDEALA DPEGLSWQIL 660 NSAWDTALPI AGQNAFPCYD REGLMKLVET AKPTNDPDHH HFSFFVFQQP APLVQSAICF 720 SELDYFIKHM HGEIMNNVES

Sequence ? help Back to Top

Protein Sequence Length: 740 aa Download sequence Send to blast

MNHQQQQPDP DPQFPNRNED PNPNPQPQPR RPRGFAATNT AGSTNKSSSG SRKEREKEKE  60
RTKLRERHRR AITSRMLSGL RQYGNFPLPV RADMNDVLAA LARQAGWNVD PDGTTYRQSP  120
PPPNINNNNI GTYQVMSVES PVSGSSLRNC STRVSVDCQH SVPRINECLS PASFDSIVVT  180
ESDVKVDKFT STTSPMNSTE CLEAGQLMQE LHSGEHGSGF SGTEYVPVFV LLSSGLINNF  240
CQLMDPDGVK QELQQLKSLN IDGVVVNCWW GIVESWVPQK YEWSGYRELF NIIRDFKMKL  300
QVLKHSLNFG FPALSHSMSY SIMRLNSYKP SMLEMFHYIS TWKYYHPPSP PTPIPEGKVT  360
QHEENGLRMT QCFMGFCFLS TKVVMAFHEN GGSDTSGMFI SLPQWVLEIG KDNQDIFFTD  420
RQGRRNTECL SWGIDKERVL RGRTAIEVYF DVMRSFRTEF DDLFTEGLIS AVEIGLGASG  480
ELKYPSFSER MGWRYPGIGE FQCYDKYSLQ NLRKAATSRG HSFWAKGPDN AGYYNSKPHE  540
TGFFCERGDY DSYYGRFFLH WYRQVLIDHA DNVLSLASLA FEGIQIVVKI PAIYWWYRTS  600
SHAAELTAGY YNPTNQDGYS PVFEVLKKHS VTIKYICSGV QVPETDEALA DPEGLSWQIL  660
NSAWDTALPI AGQNAFPCYD REGLMKLVET AKPTNDPDHH HFSFFVFQQP APLVQSAICF  720
SELDYFIKHM HGEIMNNVES

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1wdq_A	9e-94	225	733	11	444	Beta-amylase
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG975447	2e-95	HG975447.1 Solanum pennellii chromosome ch08, complete genome.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009589916.1	0.0	PREDICTED: beta-amylase 8
Swissprot	Q9FH80	0.0	BAM8_ARATH; Beta-amylase 8
TrEMBL	A0A251P1Y9	0.0	A0A251P1Y9_PRUPE; Beta-amylase
STRING	XP_009589916.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1607	24	48

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45300.2	0.0	beta-amylase 2

Publications ? help Back to Top
Soyk S, et al. The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation. Plant Cell, 2014. 26(4): p. 1746-1763 [PMID:24748042]