PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00146g03027.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | B3 | ||||||||
Protein Properties | Length: 1144aa MW: 130980 Da PI: 7.7759 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 47.6 | 3e-15 | 89 | 172 | 5 | 99 |
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 +++++++++++l +p f+++ +g+++e + ++g++W+vkl ++ + +++GW++F+++++L+ g ++ F+++g++e Peinf101Scf00146g03027.1 89 TIKPYSFSQDCLKIPVGFLKHLKGQEHE---HAILRRNGKKWQVKL--NGPR----FEEGWEKFAEEHDLQMGSVLEFRHEGDME 164 568999*************777888655...566778*********..6665....9***********************99999 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 f v+++++ Peinf101Scf00146g03027.1 165 F--EVSILDS 172 9..8888775 PP | |||||||
2 | B3 | 51.1 | 2.4e-16 | 226 | 315 | 3 | 97 |
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 + +++s++l++++l++p +f++e+g+ +++ +++++d + rsW + l + +++ + +++GW++F+ an LkegD ++F+ + Peinf101Scf00146g03027.1 226 TCTMKSYYLSNSCLRVPTPFVRENGLCNRK-CKIMIRD-EQRSWIFSL--NSCGKNTKIGGGWRNFCLANCLKEGDRLMFEIVA- 305 67889*******************888655.5999999.779******..99999999***********************876. PP SEE..EEEEE CS B3 88 sefelvvkvf 97 +++ +++k++ Peinf101Scf00146g03027.1 306 NGEIPMFKFH 315 4444677765 PP | |||||||
3 | B3 | 49 | 1.1e-15 | 348 | 434 | 5 | 96 |
-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 5 ltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 ++++++l++ l++p++fa+ h g+ke+ +t++d + rsW++ l +sg++++++ W +F+ an L+ gD v+F+++ + Peinf101Scf00146g03027.1 348 TMKPYYLANYFLCVPRPFARLHsLGNKEC--AITIND-NQRSWTFSL--HSSSGHTYIGGKWHDFCAANCLRGGDYVMFEMVAN- 426 57899999999***********7556566..466555.89*******..*******************************9875. PP EE..EEEE CS B3 89 efelvvkv 96 ++++++k+ Peinf101Scf00146g03027.1 427 GEKPTLKF 434 44456555 PP | |||||||
4 | B3 | 38 | 3e-12 | 454 | 511 | 34 | 99 |
SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 34 ktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + + ++g++W+vkl ++++ + +GW +F+++++L+ g ++vF++++++ef v++f++ Peinf101Scf00146g03027.1 454 HEHAILRRNGKEWKVKL--NGHR----FDGGWAKFAEEHDLQLGNVLVFRHERDMEF--EVTIFDS 511 345667789********..7777....9**********************9999999..9999986 PP | |||||||
5 | B3 | 60.1 | 4e-19 | 565 | 652 | 3 | 95 |
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 + +++s++l+++ l +pk+fa+e+ ++ ++ t+t++d + rsW++ l +++ +++++GW++F+ an L+egD ++F+ + + Peinf101Scf00146g03027.1 565 TCTMKSSYLSNSFLPIPKPFARENRLSD-RNCTITIRD-EQRSWTFSL--YSSGKNTYIGGGWRNFCLANCLEEGDCLMFEIVAN 645 6678999999999***********7775.4569**999.679******..88888899***********************8875 PP SEE..EEE CS B3 88 sefelvvk 95 e+++++k Peinf101Scf00146g03027.1 646 -EENPMMK 652 .4445554 PP | |||||||
6 | B3 | 46.7 | 5.6e-15 | 670 | 745 | 17 | 97 |
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ++p +fa+ hg+ + ++ +t++d + sW++ l +sg++++++GW++F+ an L egD ++F+++ +++++++k++ Peinf101Scf00146g03027.1 670 RVPLPFARLHGLRN-KTCAITIKD-KQSSWTFSL--YTSSGHTYIGGGWSDFCAANCLSEGDYIMFEMVA-NGEKPTLKFH 745 6899******7774.445788888.778******..9******************************987.4555666654 PP | |||||||
7 | B3 | 44 | 4.1e-14 | 803 | 885 | 5 | 98 |
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 ++++++ +++ + +p f+++ + +++ + + + ++W vk+ ++++ l++GW++F+++ngL+ gDf+vFk++g++e Peinf101Scf00146g03027.1 803 TIQHYSINKAYFKIPIGFLKHLK--EHG-DEHAILRRGVNKWLVKV--NGRR----LEEGWQNFAEENGLQLGDFLVFKHEGDME 878 56889999999********4443..223.3566677788*******..8888....*************************9999 PP E..EEEEE- CS B3 90 felvvkvfr 98 f v +f+ Peinf101Scf00146g03027.1 879 F--EVFIFD 885 9..665655 PP | |||||||
8 | B3 | 59.5 | 5.9e-19 | 942 | 1028 | 5 | 96 |
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 +++++ l+++ l++pk+fa+e+ +++++ t+t++de sW++ l y++++++ ++++GW eF+ an LkegD ++F+ ++ Peinf101Scf00146g03027.1 942 TIRPYCLSKHFLSIPKQFARENRLNNRR-CTITMTDE-QMSWTFSL-YTNGPNT-YFGRGWHEFCVANCLKEGDRLMFEIVS- 1019 5678999***************998766.59**9995.579*****.7777765.6999********************887. PP SEE..EEEE CS B3 88 sefelvvkv 96 +++++v+++ Peinf101Scf00146g03027.1 1020 NGETPVFRF 1028 666678776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50863 | 10.729 | 1 | 61 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 3.4E-7 | 6 | 51 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 1.41E-7 | 8 | 58 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 3.7E-22 | 79 | 175 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 5.89E-19 | 82 | 175 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 1.81E-14 | 84 | 171 | No hit | No description |
PROSITE profile | PS50863 | 12.182 | 85 | 173 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 2.2E-13 | 86 | 173 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 2.0E-12 | 89 | 171 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 1.4E-16 | 221 | 315 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 4.12E-16 | 223 | 315 | IPR015300 | DNA-binding pseudobarrel domain |
SMART | SM01019 | 5.4E-15 | 224 | 318 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 11.984 | 224 | 317 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 2.5E-14 | 225 | 317 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 1.21E-12 | 229 | 315 | No hit | No description |
Gene3D | G3DSA:2.40.330.10 | 1.6E-16 | 342 | 433 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 9.22E-17 | 342 | 434 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 5.94E-12 | 343 | 435 | No hit | No description |
PROSITE profile | PS50863 | 10.729 | 344 | 437 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 6.5E-12 | 345 | 438 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 2.7E-13 | 348 | 434 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 2.77E-12 | 434 | 510 | No hit | No description |
SuperFamily | SSF101936 | 1.0E-14 | 439 | 514 | IPR015300 | DNA-binding pseudobarrel domain |
SMART | SM01019 | 8.1E-4 | 439 | 512 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 7.9E-9 | 448 | 511 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 2.0E-15 | 449 | 514 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 11.533 | 458 | 512 | IPR003340 | B3 DNA binding domain |
SuperFamily | SSF101936 | 5.1E-19 | 561 | 654 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 3.9E-19 | 562 | 654 | IPR015300 | DNA-binding pseudobarrel domain |
SMART | SM01019 | 4.3E-17 | 563 | 657 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 12.971 | 563 | 656 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 3.0E-17 | 564 | 653 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 1.67E-15 | 568 | 656 | No hit | No description |
SMART | SM01019 | 3.9E-10 | 663 | 748 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 5.1E-13 | 667 | 742 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 6.67E-14 | 669 | 744 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 3.65E-13 | 670 | 746 | No hit | No description |
Pfam | PF02362 | 3.9E-13 | 670 | 745 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 10.743 | 671 | 748 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 1.2E-20 | 795 | 889 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 6.28E-18 | 797 | 889 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 7.24E-12 | 798 | 885 | No hit | No description |
PROSITE profile | PS50863 | 12.252 | 799 | 887 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 3.1E-13 | 800 | 887 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 5.5E-11 | 803 | 884 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 1.6E-21 | 935 | 1028 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 1.1E-20 | 936 | 1029 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 9.49E-17 | 937 | 1029 | No hit | No description |
SMART | SM01019 | 6.6E-20 | 938 | 1032 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 12.887 | 938 | 1031 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 4.9E-17 | 942 | 1028 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009507 | Cellular Component | chloroplast | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1144 aa Download sequence Send to blast |
MITIRDEQMS WAFSLYPCRE STYIGGGWHN FFLENCLKQG DCVAFEIVVT GKKPILKTGQ 60 RIQTSNMTSP KAQVPASTSA NANPHFISTI KPYSFSQDCL KIPVGFLKHL KGQEHEHAIL 120 RRNGKKWQVK LNGPRFEEGW EKFAEEHDLQ MGSVLEFRHE GDMEFEVSIL DSSQCDKEYV 180 DHLQEEEEET AKKSDLEGKL KIMSSDKALP NVEAAKDMPL DPAHFTCTMK SYYLSNSCLR 240 VPTPFVRENG LCNRKCKIMI RDEQRSWIFS LNSCGKNTKI GGGWRNFCLA NCLKEGDRLM 300 FEIVANGEIP MFKFHERPKP NIKSSDAAFP NVEAAIDMPL LHPHFICTMK PYYLANYFLC 360 VPRPFARLHS LGNKECAITI NDNQRSWTFS LHSSSGHTYI GGKWHDFCAA NCLRGGDYVM 420 FEMVANGEKP TLKFHGKILC PALSVLKYLK GQEHEHAILR RNGKEWKVKL NGHRFDGGWA 480 KFAEEHDLQL GNVLVFRHER DMEFEVTIFD SSQCNGEYVE HIQEEGEETA KKSDLEENSK 540 IISSDKAFPN VEAAKDLHFG QAHFTCTMKS SYLSNSFLPI PKPFARENRL SDRNCTITIR 600 DEQRSWTFSL YSSGKNTYIG GGWRNFCLAN CLEEGDCLMF EIVANEENPM MKFHAYMNCL 660 CETDHKLLQR VPLPFARLHG LRNKTCAITI KDKQSSWTFS LYTSSGHTYI GGGWSDFCAA 720 NCLSEGDYIM FEMVANGEKP TLKFHDLKVH ASLQPEGKKT SLDAESVFTQ GLRIETSEMT 780 AVKEQAPAST SANAIANPHF ISTIQHYSIN KAYFKIPIGF LKHLKEHGDE HAILRRGVNK 840 WLVKVNGRRL EEGWQNFAEE NGLQLGDFLV FKHEGDMEFE VFIFDSSQCE RVNGWSQQVV 900 HEREEAKEKP KSNIKTSSGK AFPKVESAYK DMHLTHPHFI CTIRPYCLSK HFLSIPKQFA 960 RENRLNNRRC TITMTDEQMS WTFSLYTNGP NTYFGRGWHE FCVANCLKEG DRLMFEIVSN 1020 GETPVFRFYG NYDIVVSIGK IDLRGSPSLQ LELKKNNLDN YKRIRDKGLH FQEEKTDLRK 1080 TSNVTAPILQ VPASTSADDA NPYFISTIKS YTMKNPVLVF KFRFIIEAMF CFEKKKNCRI 1140 ISVK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019254330.1 | 1e-149 | PREDICTED: B3 domain-containing protein REM10-like isoform X3 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA322 | 15 | 171 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26680.1 | 2e-42 | B3 family protein |