PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00139g02023.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 339aa    MW: 38543.6 Da    PI: 9.1374
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00139g02023.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.87.5e-52141391128
                       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85 
                               lppGfrF Ptdeel+v+yL++kv+g++++l ++i e+d+yk++Pw Lp+k+  +ekewyfFs+rd+ky++g+r+nr++ sgyWka
  Peinf101Scf00139g02023.1  14 LPPGFRFYPTDEELLVQYLCRKVAGHDFPL-QIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKA 97 
                               79****************************.89***************7777799****************************** PP

                       NAM  86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                               tg+dk + + +g++vg+kk Lvfy g+apkg+kt+W+mheyrl
  Peinf101Scf00139g02023.1  98 TGTDKVIST-QGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRL 139
                               ****99999.999****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.28E-6410159IPR003441NAC domain
PROSITE profilePS5100559.58514158IPR003441NAC domain
PfamPF023652.3E-2615139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MGVQEKDPLL QLSLPPGFRF YPTDEELLVQ YLCRKVAGHD FPLQIIGEID LYKFDPWVLP  60
SKAIFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKVISTQGRK VGIKKALVFY  120
VGKAPKGTKT NWIMHEYRLI EPSRKTGNEW VLCRIYKKNS SGQKPQVSGL QSKEYSHGSS  180
TSSSSQFDDM LESLPEMDDR IQRLNSLKPF QQGEKLNLER LDSANFDWAI LAGLKPMPEL  240
GPANQAPGVQ AQGLANNIHN NNNMNFLNDV YVQPTNFRGI TKIENVVDEE VESGIRNQRF  300
DKSGYFQPLV NGFSQNYTNA VDQFTIQCPN QTLNLGFRQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-10611644171NO APICAL MERISTEM PROTEIN
1ut4_B1e-10611644171NO APICAL MERISTEM PROTEIN
1ut7_A1e-10611644171NO APICAL MERISTEM PROTEIN
1ut7_B1e-10611644171NO APICAL MERISTEM PROTEIN
4dul_A1e-10611644171NAC domain-containing protein 19
4dul_B1e-10611644171NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in abscisic acid-mediated stomatal closure (PubMed:25005917). Regulates the expression of NCED1, a gene involved in the biosynthesis of abscisic acid (ABA) (PubMed:25005917). Required for the stomatal closure induced by the bacterial pathogen Pseudomonas syringae pv tomato DC3000, but not for stomatal reopening (PubMed:25005917). {ECO:0000269|PubMed:25005917}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by abscisic acid (ABA), dehydration and wounding. {ECO:0000269|PubMed:25005917}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001233972.10.0jasmonic acid 2
SwissprotQ9SQL00.0JA2_SOLLC; NAC domain-containing protein JA2
TrEMBLA0A1S3XJF80.0A0A1S3XJF8_TOBAC; NAC domain-containing protein 72-like
STRINGSolyc12g013620.1.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31222452
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-119NAC family protein
Publications ? help Back to Top
  1. Tomato Genome Consortium
    The tomato genome sequence provides insights into fleshy fruit evolution.
    Nature, 2012. 485(7400): p. 635-41
    [PMID:22660326]