PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00128g01013.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | B3 | ||||||||
Protein Properties | Length: 184aa MW: 21418.1 Da PI: 10.0663 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 41.2 | 2.9e-13 | 11 | 84 | 8 | 83 |
-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEE CS B3 8 sdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFk 83 ++v++ + +lpkkfa+ + ++k++ l+++de+ rs +++l + ++ r y+ ++GW++Fv++ Lk gD + F+ Peinf101Scf00128g01013.1 11 AYVNTPC-QSLPKKFATVNgvTNVKKC--PLIIRDERQRSRDLTL--CSSKTRvYITGSGWRKFVDDVCLKKGDYIQFE 84 5666666.89******99955445555..5***************..77777747777********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 3.53E-10 | 8 | 84 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 2.8E-10 | 16 | 85 | IPR015300 | DNA-binding pseudobarrel domain |
Pfam | PF02362 | 2.8E-10 | 17 | 84 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 1.46E-7 | 19 | 84 | No hit | No description |
Gene3D | G3DSA:2.40.330.10 | 8.5E-5 | 132 | 179 | IPR015300 | DNA-binding pseudobarrel domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence Send to blast |
MKNMSCLMMC AYVNTPCQSL PKKFATVNGV TNVKKCPLII RDERQRSRDL TLCSSKTRVY 60 ITGSGWRKFV DDVCLKKGDY IQFETPMQKF QGKSIIFLSW VKILDLILMK HSGTESRVQH 120 QEKAFPNVES AKDTHLPHFF GTIKPYNISM HILYVPRQFA LKNNLNNRRC MITITDEKWS 180 WSCN |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA322 | 15 | 171 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00260.1 | 2e-08 | B3 family protein |