PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00128g01012.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family B3
Protein Properties Length: 406aa    MW: 47153.3 Da    PI: 10.1601
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00128g01012.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.51.3e-141694999
                              HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                        B3  9 dvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
                                +k+g l lp  f+ ++ +g ++   +  +  + g++W vkl  ++++    +++GW++Fv++n+L+ g ++vFk++g++ef   v
  Peinf101Scf00128g01012.1 16 PGFKHG-LKLPIGFL-KYlKGREN---EHAVLRRVGKKWLVKL--NGHR----FKEGWEKFVEENDLELGNILVFKHEGDMEF--EV 89
                              455555.********.55466644...5677889*********..7777....9***********************999999..99 PP

                              EEE-S CS
                        B3 95 kvfrk 99
                              ++f++
  Peinf101Scf00128g01012.1 90 TIFDS 94
                              99986 PP
2B352.96.9e-171352091796
                               E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                        B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                               ++p +fa+e+ + +++  ++t++d + rsW++ l    ++g++++++GW+eF++ n LkegD ++F+++++ ++++ +++
  Peinf101Scf00128g01012.1 135 SIPIQFARENRLRNKR-CMITMTD-ERRSWTFSL--FTNGGHTYFGRGWREFCSTNCLKEGDRLMFEMVSN-GESPAFRF 209
                               8*********766544.4788777.78*******..88889999***********************9874.44456655 PP
3B365.39.3e-21249335697
                               ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                        B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                               ++++ l++  lv+pk+fa+++++++++  t+++++ + rsW++ l    +++ +++++GW+eF+ an++kegD ++F+ ++ +++
  Peinf101Scf00128g01012.1 249 IRPYCLSTTFLVIPKQFARKNKLNNRK-CTISMRN-EQRSWTFSL--YTSGRNTYFGRGWREFCVANRVKEGDRLMFEIVS-NGE 328
                               6788899999***********999765.59**999.779******..88888899***********************887.666 PP

                               ..EEEEE CS
                        B3  91 elvvkvf 97 
                               ++v++++
  Peinf101Scf00128g01012.1 329 TPVFRFY 335
                               6888876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019361.16E-20497IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.2E-21497IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086312.421795IPR003340B3 DNA binding domain
CDDcd100175.08E-15893No hitNo description
SMARTSM010191.1E-151095IPR003340B3 DNA binding domain
PfamPF023622.3E-111894IPR003340B3 DNA binding domain
SMARTSM010192.6E-14122213IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.103.9E-16133206IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.77E-16134209IPR015300DNA-binding pseudobarrel domain
PfamPF023624.4E-15135209IPR003340B3 DNA binding domain
CDDcd100172.66E-14135210No hitNo description
PROSITE profilePS5086312.012136213IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.6E-22241334IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.16E-21242336IPR015300DNA-binding pseudobarrel domain
CDDcd100171.25E-15243335No hitNo description
SMARTSM010197.0E-22244338IPR003340B3 DNA binding domain
PROSITE profilePS5086313.493244337IPR003340B3 DNA binding domain
PfamPF023628.6E-19249335IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    Send to blast
MKVPPRKPHF FKPIQPGFKH GLKLPIGFLK YLKGRENEHA VLRRVGKKWL VKLNGHRFKE  60
GWEKFVEEND LELGNILVFK HEGDMEFEVT IFDSSHCEKE CELPQQGLDE REEEKGVNMH  120
HIDSLFPTGY KLFQSIPIQF ARENRLRNKR CMITMTDERR SWTFSLFTNG GHTYFGRGWR  180
EFCSTNCLKE GDRLMFEMVS NGESPAFRFY GKNETEKPES KIKTSVKAFS KLGATKDKHL  240
SHPHFICIIR PYCLSTTFLV IPKQFARKNK LNNRKCTISM RNEQRSWTFS LYTSGRNTYF  300
GRGWREFCVA NRVKEGDRLM FEIVSNGETP VFRFYGKGNA PLQPRRKKTN LDVQSVSTQG  360
LDQSLGAVFG MEKGKYVGKD APGIREALDK LMEQLMMGNG KEPGRM
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016505442.11e-141PREDICTED: putative B3 domain-containing protein REM15
TrEMBLA0A1S4CW371e-140A0A1S4CW37_TOBAC; putative B3 domain-containing protein REM15
STRINGXP_009792889.11e-139(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32215171
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.11e-47B3 family protein