PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00113g01010.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

MYB_related

Protein Properties

Length: 149aa MW: 16976 Da PI: 4.4842

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00113g01010.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.1	9.9e-09	14	41	1	28
TSSS-HHHHHHHHHHHHHTTTT-HHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIa 28 +g+WT+eEd ll ++++++G g W+ ++ Peinf101Scf00113g01010.1 14 KGSWTEEEDILLRKCIEKYGEGKWHQVP 41 799*********************9987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50090	6.632	9	40	IPR017877	Myb-like domain
Gene3D	G3DSA:1.10.10.60	3.1E-10	12	43	IPR009057	Homeodomain-like
SuperFamily	SSF46689	1.29E-7	13	43	IPR009057	Homeodomain-like
Pfam	PF00249	3.8E-7	14	41	IPR001005	SANT/Myb domain
CDD	cd00167	1.81E-5	16	40	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 149 aa Download sequence Send to blast
MKTSVFTSSG VLRKGSWTEE EDILLRKCIE KYGEGKWHQV PVRAAKNNVS TIHKDEHSKQ 60 EIIIEKPTTA EVVSRDENVE WWTNLLLDNC NGFEKAATES TSAFKNIESL LNEELLSPSI 120 NGGTYYPIQE TRDMGWSDLS IDADLWELL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HQ428105	1e-170	HQ428105.1 Petunia x hybrida cultivar Violet 30 anthocyanin 4 (AN4) gene, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009626596.1	9e-15	PREDICTED: transcription factor MYB90-like
TrEMBL	E9N666	2e-67	E9N666_PETHY; Anthocyanin 4

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA12	24	2154

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56650.1	9e-16	production of anthocyanin pigment 1