PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00101g02004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | ERF | ||||||||
Protein Properties | Length: 297aa MW: 33053.3 Da PI: 4.5569 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.2 | 1.8e-17 | 67 | 116 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a+++++g Peinf101Scf00101g02004.1 67 TYVGVRMRA-WGKWVSEIREPKK---KSRIWLGTFATPEMAARAHDVAALSIKG 116 599***998.**********854...6***********************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 21.944 | 67 | 125 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 4.4E-32 | 67 | 131 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 6.1E-29 | 67 | 126 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.4E-18 | 67 | 125 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 1.9E-11 | 67 | 116 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.57E-29 | 68 | 125 | No hit | No description |
PRINTS | PR00367 | 1.3E-8 | 68 | 79 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.3E-8 | 90 | 106 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence Send to blast |
MADPTNSETD QSSSYNSYSP SSSSSLLENY TINSKNRSKR CREQQQEEDD DDVTKNSKKK 60 SDGKHPTYVG VRMRAWGKWV SEIREPKKKS RIWLGTFATP EMAARAHDVA ALSIKGKKSA 120 ILNFPQFAHL LPRPVTCSPR DVQAAAVKAA HMDHLNSNSD TDSFESVPAG SITSSSSSLV 180 SSITSPCDEE STPPEEAAEI LPAAEVQPQQ EELSEIVELP RLDTCYESTQ EVLRFIESDG 240 WDYYGHPVPW LQQHTTTSLG SDCEYFGGDQ SNNYMTFTTE LESTMVSTSF ESLLWQL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 1e-15 | 65 | 126 | 12 | 73 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009620060.1 | 5e-99 | PREDICTED: ethylene-responsive transcription factor TINY-like | ||||
Swissprot | Q9LYD3 | 1e-50 | DREB3_ARATH; Dehydration-responsive element-binding protein 3 | ||||
TrEMBL | A0A1J6JYG6 | 7e-95 | A0A1J6JYG6_NICAT; Dehydration-responsive element-binding protein 3 | ||||
STRING | XP_009620060.1 | 2e-98 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA212 | 24 | 225 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 3e-49 | ERF family protein |
Publications ? help Back to Top | |||
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