PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00091g08012.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 213aa    MW: 23467.2 Da    PI: 4.9361
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00091g08012.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.64.5e-111443130
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIart 30
                              +g+WT+eEd++l++++k++G g+W++ ++ 
  Peinf101Scf00091g08012.1 14 KGPWTPEEDQKLINYIKKHGHGSWRALPKL 43
                              79***********************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.7E-14543IPR009057Homeodomain-like
PROSITE profilePS5129410.861960IPR017930Myb domain
SuperFamilySSF466891.15E-91144IPR009057Homeodomain-like
SMARTSM007170.00311358IPR001005SANT/Myb domain
PfamPF002492.1E-91443IPR001005SANT/Myb domain
CDDcd001672.39E-71642No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
MGRSPCCDET GLKKGPWTPE EDQKLINYIK KHGHGSWRAL PKLAEVARIK YLQYLLQPSM  60
AANLANSMST SNTSSVANIS DMEAYNNLLN IGTNHLENSL NNIPPPSTTL QAIQDSITFS  120
HLPELQATPY CNFQNSLNKE NMVQTHVISQ GENTPTSPWQ LPSSLSPAEN DNQPINSYIN  180
NMGGSCNPPF FGGAHPSVWP EILLEDSLFQ DIA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754433e-48HG975443.1 Solanum pennellii chromosome ch04, complete genome.
GenBankHG9755163e-48HG975516.1 Solanum lycopersicum chromosome ch04, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019260888.15e-32PREDICTED: transcription factor MYB39-like
TrEMBLA0A314LAP41e-30A0A314LAP4_NICAT; Transcription factor myb39
STRINGXP_009778686.11e-30(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34670.15e-27myb domain protein 93