PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00074g02007.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 449aa    MW: 47831.4 Da    PI: 5.2736
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00074g02007.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.53e-1398142347
                               SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                               +WT+eE+ l++++ +++G g+W++I+r     Rt+ q+ s+ qk+
  Peinf101Scf00074g02007.1  98 AWTAEEHRLFLQGLEKYGRGDWRSISRNCVVSRTPTQVASHAQKF 142
                               7***************************999************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512936.597161IPR017884SANT domain
SMARTSM007179.5E-4859IPR001005SANT/Myb domain
CDDcd001672.65E-51157No hitNo description
SuperFamilySSF466899.72E-91164IPR009057Homeodomain-like
PROSITE profilePS5129417.46891147IPR017930Myb domain
SuperFamilySSF466895.01E-1693148IPR009057Homeodomain-like
SMARTSM007178.2E-1195145IPR001005SANT/Myb domain
TIGRFAMsTIGR015579.6E-1795145IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.606.2E-1196138IPR009057Homeodomain-like
CDDcd001671.27E-1098143No hitNo description
PfamPF002492.2E-1098141IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    Send to blast
MSSDQTCNTS SWTKEEDRAF ETALAIYSGD SNQLMKIAAV VPQKSLREII QHYKDLVDDV  60
NDIEAGKVPI PEYTRMQSGS SHRSRLSGAE AARRKGVAWT AEEHRLFLQG LEKYGRGDWR  120
SISRNCVVSR TPTQVASHAQ KFFSRLNDVN KGKRRRSIHD ITTVDTDTIG PSQGQKSDKL  180
IGSYGGQLQW PITDYVTEAF GTGMLSLAGP VTNCSIGTIE GPSAVNPEKF PFGAAVVSGL  240
NSSLPDVDDE FVLGVEDLIT VPADGTSEAW CGGDTRTSPL LSLQPSIAGG TGLYNCPVNS  300
VGNQLGQVFT KQLVGAAELG PVVDTARLPW PNADHLGVHG CPASSIGAKN GFGSTVGAPE  360
GAFSVDSIAF PSIPGNSHGV HPGLNATIKG APEGGFLIDP KTLPSIPAAT RGVYPSLNST  420
IKDDNIFDLE DLFPDHIVRF HEKESIADS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009631817.10.0PREDICTED: uncharacterized protein LOC104121509 isoform X1
RefseqXP_016467664.10.0PREDICTED: uncharacterized protein LOC107790243 isoform X1
RefseqXP_016467729.10.0PREDICTED: uncharacterized protein LOC107790243 isoform X2
RefseqXP_018622197.10.0PREDICTED: uncharacterized protein LOC104121509 isoform X2
RefseqXP_019265247.10.0PREDICTED: uncharacterized protein LOC109242839 isoform X2
TrEMBLA0A1S3ZTK40.0A0A1S3ZTK4_TOBAC; uncharacterized protein LOC107790243 isoform X1
TrEMBLA0A1S3ZTS00.0A0A1S3ZTS0_TOBAC; uncharacterized protein LOC107790243 isoform X2
STRINGXP_009631817.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA139501113
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.18e-49MYB family protein