PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Peinf101Scf00049g07032.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 239aa MW: 27065.5 Da PI: 8.9414 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 59.8 | 5.2e-19 | 189 | 227 | 1 | 38 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEE CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkv 38 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+ Peinf101Scf00049g07032.1 189 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQW 227 58***************************99******84 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 8.7E-20 | 174 | 232 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.96E-17 | 182 | 230 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 19.221 | 184 | 226 | IPR003657 | WRKY domain |
SMART | SM00774 | 4.6E-13 | 189 | 236 | IPR003657 | WRKY domain |
Pfam | PF03106 | 7.9E-17 | 190 | 231 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 239 aa Download sequence Send to blast |
MDISSKFESE KLETIDLSLK LDHEEPSNHE VNSSRKLSQL DAKIQSKEQE LGENSKIEEF 60 SVLQKKMNMM KEENKVLRKA VEQTMKDYQM MFKSPKEFDM NIKRSTPSPT SQEDDTKEGE 120 LGLSLTLLSS NSSARKETKE DDITTGFSPI QSNTSHGSYL GGGLTSQVTS PQNRKARVSV 180 RARCETATMN DGCQWRKYGQ KIAKGNPCPR AYYRCTVAPG CPVRKQWRIQ QRVHDFGGT |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | INDUCTION: Induced by potassium deprivation. {ECO:0000269|PubMed:15173595}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_016490862.1 | 3e-96 | PREDICTED: probable WRKY transcription factor 9 isoform X2 | ||||
Swissprot | Q9C9F0 | 3e-41 | WRKY9_ARATH; Probable WRKY transcription factor 9 | ||||
TrEMBL | A0A1S4BPP8 | 7e-95 | A0A1S4BPP8_TOBAC; probable WRKY transcription factor 9 isoform X2 | ||||
STRING | XP_009800949.1 | 2e-65 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA7287 | 21 | 29 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G68150.1 | 5e-36 | WRKY DNA-binding protein 9 |