PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00046g07023.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ARR-B
Protein Properties Length: 614aa    MW: 68969.2 Da    PI: 4.351
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00046g07023.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like58.11.9e-18235280551
                   G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                               +WtpeLH++F+e+v qL G+    Pk+ilelm+v+gLt+ +v+SHLQ
  Peinf101Scf00046g07023.1 235 EWTPELHAKFMEVVCQL-GEGACYPKEILELMNVPGLTRMQVASHLQ 280
                               7****************.9999************************9 PP
2Response_reg25.37.7e-10171191104
                               EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTH CS
              Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgee 83 
                               vl+vd +  ++  +  +le+ +y +v+  d ++ a   l + +  +D++++ i  p++  ++ll +  + +  + i +v ++   
  Peinf101Scf00046g07023.1  17 VLLVDHDTEFAFEIVDLLESYEY-KVTIIDLASTATSVLSKDKgrFDIMIVNIHSPDLLSFQLLAQAVALD-IVSI-FVCDEHHT 98 
                               89*********************.***************777777****************9999988877.4555.55555556 PP

                               HHHHHHHHTTESEEEESS--H CS
              Response_reg  84 edalealkaGakdflsKpfdp 104
                                +a +al+ Ga  +l Kp ++
  Peinf101Scf00046g07023.1  99 VLARRALDIGACLYLKKPLHE 119
                               9*****************765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521721.12E-1314150IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23002.1E-1414145No hitNo description
SMARTSM004480.00515125IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011021.25916130IPR001789Signal transduction response regulator, receiver domain
PfamPF000727.4E-517120IPR001789Signal transduction response regulator, receiver domain
CDDcd001563.71E-718136No hitNo description
SuperFamilySSF466895.02E-13231280IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.1E-17233280IPR009057Homeodomain-like
TIGRFAMsTIGR015573.5E-15234280IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 614 aa     Download sequence    Send to blast
MEYLMSPYYG MIDEVRVLLV DHDTEFAFEI VDLLESYEYK VTIIDLASTA TSVLSKDKGR  60
FDIMIVNIHS PDLLSFQLLA QAVALDIVSI FVCDEHHTVL ARRALDIGAC LYLKKPLHEE  120
FVKYMWQFVL RKRLKKENER EERTGEINIV DDSTIICNNI VGNEQVGVKI ISNNNEDEHD  180
ERDNHTEVEN NNINVVSKEK YKVRTSKRGR KRTTTTEVEL DSQNTGGPRR KVCTEWTPEL  240
HAKFMEVVCQ LGEGACYPKE ILELMNVPGL TRMQVASHLQ GSSGGSQQRI SQRKFGSMPR  300
LQTNFLQQQH QQPNQDQSQR VPIPPEFVFP PLNNNTFARG EISTEQQVYR PQLVHVEPHY  360
INIGNPVNNP LLSQINVGGL QQHTGGPYAM VGLGQGGPVI DESAVYAHCL GNHVQDYYNM  420
NVNMGIGTYS DSAMISDTNE NVTTDGFVAA AANANFQQFY GEHSLSDPSM NFVASHTSDS  480
ESESDERTNC DEYFNFNDVD YFFKNLGPPD NDLPNEQGDS EFDQVYSDDQ VAPTPSVQFF  540
GTTSSPDEEG GSEFDQVYSD NQVAPTPSVQ FQGTTSFPDE QGGNEFNQVY FDDQVAPSPS  600
VQFPGMKSFP NEST
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016461121.11e-166PREDICTED: two-component response regulator ORR21-like
TrEMBLA0A1J6J4W61e-168A0A1J6J4W6_NICAT; Two-component response regulator arr1
STRINGXP_009798262.11e-120(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8132384
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.12e-24response regulator 2