PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00039g14008.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | WRKY | ||||||||
Protein Properties | Length: 584aa MW: 63221.3 Da PI: 6.4639 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.1 | 1.2e-30 | 328 | 386 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ Peinf101Scf00039g14008.1 328 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILITTYEGNHNHP 386 7***************************99****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.2E-33 | 312 | 388 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.1E-27 | 320 | 388 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.792 | 322 | 388 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.0E-36 | 327 | 387 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.1E-26 | 329 | 386 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 584 aa Download sequence Send to blast |
MAKGSGLFFD PDPTTQLINS FLDPLKDHNF SFYHQYPNKL LKLEPLSSSS NMESPSKNMS 60 PPPTIHFPVN LINCVNDQEQ QPKRPVLDEM DFFAHDKKDG TSITTESATD TGRKESNVPL 120 DLDFSINTGL HLHTANTSSD QSIVEDGLSP NLAVLQAELE RINGENRHLR DMLNQATTNY 180 SGLQMHLMKV MQQKQHNEHD KGEEIKKQLH LSSQNGHGGS GEQRPRQFMD LGLADEASLS 240 SSEGRSGREQ SRSPTTNIVE SGSTSTGGLI DSHEGSPEKS LSCWGPNNKL ARVHGNDQSK 300 ISVDETTEAT IRKARVSVRA RSEAPMITDG CQWRKYGQKM AKGNPCPRAY YRCTMAAGCP 360 VRKQVQRCAE DRTILITTYE GNHNHPLPPT AAAMASATSS AARMLLSGSM PSADGLMNSN 420 ILARTLLPCS SSMATISASA PFPTVTLDLT QPPDSSQFKG PSNQFQVPFQ NSPHSFPGNP 480 AALLPQIFGQ ALHNQSKFSG LQMSQDLGSA QLGQNPSTLP SIGDTVSALT ADPNFSAALA 540 AAITSLIGNS PHSNNVTNNN NTATMTTCSN SNGTAEDYYM ETFI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 6e-22 | 314 | 389 | 1 | 75 | WRKY transcription factor 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in the control of processes related to senescence and pathogen defense (PubMed:12000796). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (PubMed:12000796). Activates the transcription of the SIRK gene and represses its own expression and that of the WRKY42 genes (PubMed:12000796). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000269|PubMed:12000796, ECO:0000269|PubMed:25733771}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By salicylic acid, ethylene, jasmonic acid, pathogens, wounding and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019245788.1 | 0.0 | PREDICTED: probable WRKY transcription factor 31 | ||||
Swissprot | Q9C519 | 1e-125 | WRKY6_ARATH; WRKY transcription factor 6 | ||||
TrEMBL | A0A1J6IGE4 | 0.0 | A0A1J6IGE4_NICAT; Putative wrky transcription factor 31 | ||||
STRING | XP_009616884.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA945 | 24 | 92 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G04450.1 | 1e-115 | WRKY family protein |