PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00032g13016.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family HD-ZIP
Protein Properties Length: 342aa    MW: 37970 Da    PI: 9.0924
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00032g13016.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.22.9e-18176230256
                               T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
                  Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                               rk+ ++tkeq   Lee F+++++++ +++  LAk+l+L  rqV vWFqNrRa+ k
  Peinf101Scf00032g13016.1 176 RKKLRLTKEQSSYLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 230
                               788899***********************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466895.43E-18170233IPR009057Homeodomain-like
PROSITE profilePS5007116.86172232IPR001356Homeobox domain
SMARTSM003898.7E-15174236IPR001356Homeobox domain
CDDcd000863.39E-14176233No hitNo description
Gene3DG3DSA:1.10.10.604.0E-17176230IPR009057Homeodomain-like
PfamPF000461.0E-15176230IPR001356Homeobox domain
PROSITE patternPS000270207230IPR017970Homeobox, conserved site
PfamPF021836.1E-10232266IPR003106Leucine zipper, homeobox-associated
SMARTSM003407.1E-25232275IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MELALTLGGD TSKQILFLEK SSSSSSLHEN MMTSSKDLGL CMGLRKCSED DSRRKRRNED  60
HENKRSKDPL LQLDLLPSSP VTRNSLSQLH FPWLTENSLA NGPAGKVLEM KRQLVAEETE  120
EGAALSSPNS AISTFQVNFP VYKNGKSTGN KRDHSELERW GSCSRVSDEE ADGLARKKLR  180
LTKEQSSYLE ESFKEHSTLN PKQKLALAKQ LNLRPRQVEV WFQNRRARTK LKQTEVDCEY  240
LKKCCETLTE ENKRLQKELQ ELRALKSSQP FYMQLPATTL TMCPSCERVA TTTTSAATAT  300
TAATSTATAA SVATANTTLS LAKPQVLLPF SPAQVQAPQA AS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1224232RRARTKLKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009798791.11e-163PREDICTED: homeobox-leucine zipper protein HAT14-like isoform X2
RefseqXP_016456347.11e-163PREDICTED: homeobox-leucine zipper protein HAT14-like isoform X2
SwissprotP466653e-93HAT14_ARATH; Homeobox-leucine zipper protein HAT14
TrEMBLA0A1S3YWX91e-162A0A1S3YWX9_TOBAC; homeobox-leucine zipper protein HAT14-like isoform X2
TrEMBLA0A1U7YA231e-162A0A1U7YA23_NICSY; homeobox-leucine zipper protein HAT14-like isoform X2
STRINGXP_009798790.11e-162(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29024186
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06710.12e-76homeobox from Arabidopsis thaliana