PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00019g18019.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | bZIP | ||||||||
Protein Properties | Length: 581aa MW: 63563.1 Da PI: 7.0499 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.7 | 3.7e-11 | 425 | 483 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i+eLe kv++L++e ++L +l l+ ++ l+s++ Peinf101Scf00019g18019.1 425 KRAKRILANRQSAARSKERKMRYIAELEHKVQTLQTEATTLSAQLTLLQRDSSGLTSQN 483 9*************************************************999999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.3E-18 | 421 | 485 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.875 | 423 | 486 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.1E-10 | 425 | 483 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.82E-11 | 425 | 475 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.8E-11 | 425 | 482 | No hit | No description |
CDD | cd14703 | 3.96E-24 | 426 | 475 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 581 aa Download sequence Send to blast |
MGGESDEANA DMMRRLQSSF GTSSSKHQPI LTNQLDIPQL STSQFHGQMR QFSPNFGGEN 60 STRRAGLSPS HPQMPPISPY SHIPVSRPTS HQPGMQSFTT QGPSHSRSLS QSSFFSLDSL 120 PPLSPSPYKE VPSTFISDPV APDVSMEDRD GNSHSSLPPS PYSRCNSSRV GESLPPRKAH 180 RRSNSDIPFG FSNIIQSSPP LAPSRSPGAL ERSVPSRDFS GGKPVQLVKR EACWDKRNEN 240 NAEGMGERKS EGEVVDDLFN AYMNLDNIEA LNSSGTDEKH GIENREDLDS RASGTKTNGC 300 DSSDNEATSS VNDSGSSMPT LGTSSSIEKR EGIKRSAGGD IAPTVRHYRS VSMDSFMGKL 360 NFADESPRLP PSPGPHPGQL SPTNSLDANS DSFSLEFGNG EFSGAELKKI MANEKLAEIA 420 LADPKRAKRI LANRQSAARS KERKMRYIAE LEHKVQTLQT EATTLSAQLT LLQRDSSGLT 480 SQNNELKFRL QAMEQQAQLR DALNEALTAE VQRLKIATAE LNGEAAKFQQ LSLNPQMFQL 540 QRQQATQLSM HQLQQQQQQQ QSSSQHQQQL NSSAPAKNES K |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009625788.1 | 0.0 | PREDICTED: probable transcription factor PosF21 | ||||
Refseq | XP_009625795.1 | 0.0 | PREDICTED: probable transcription factor PosF21 | ||||
Refseq | XP_009625801.1 | 0.0 | PREDICTED: probable transcription factor PosF21 | ||||
TrEMBL | A0A1S4CWD2 | 0.0 | A0A1S4CWD2_TOBAC; probable transcription factor PosF21 | ||||
STRING | XP_009625788.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1265 | 24 | 78 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38900.3 | 1e-148 | bZIP family protein |