PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00019g00003.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family C2H2
Protein Properties Length: 170aa    MW: 18819 Da    PI: 10.5219
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00019g00003.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.000464466123
                              EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                              y+C+ C++ F ++  L  H++ H
  Peinf101Scf00019g00003.1 44 YSCNFCKRKFYSSQALGGHQNAH 66
                              99******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576673.08E-74071No hitNo description
Gene3DG3DSA:3.30.160.605.7E-44270IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015711.1774471IPR007087Zinc finger, C2H2
PROSITE patternPS0002804666IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MRSAQEGNQG TAVLDQGEWL NLSLGRNSPS ASSESHTPTP GKVYSCNFCK RKFYSSQALG  60
GHQNAHKRER GAVRQYQSQR MMTMMALPIN NPMFRSLGII PHSLSHKLGR DVSPTAATFS  120
EASAGFQMTS HSNQMHNSFD HKWPGSFQLN QQQSKGQASN PNNLDLNLKL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009617394.12e-99PREDICTED: zinc finger protein 7-like
RefseqXP_016483734.12e-99PREDICTED: zinc finger protein 7-like
TrEMBLA0A1S4B4G44e-98A0A1S4B4G4_TOBAC; zinc finger protein 7-like
STRINGXP_009617394.16e-99(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32691313
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25160.11e-18zinc finger protein 3