PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Ctg13679913g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 139aa    MW: 15153 Da    PI: 4.7635
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Ctg13679913g00001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.65.3e-121154344
                                 SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
              Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                                  W+ e d+ + +a + ++ +   +W++Ia+ ++ g+tl+++k+++
  Peinf101Ctg13679913g00001.1 11 VWSREQDKAFENALATYPEDsedRWEKIASDVP-GKTLEEVKHHY 54
                                 6********************************.**********9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007174.4E-10860IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.1E-61059IPR009057Homeodomain-like
SuperFamilySSF466891.87E-121066IPR009057Homeodomain-like
PfamPF002492.8E-91154IPR001005SANT/Myb domain
CDDcd001678.63E-101258No hitNo description
PROSITE profilePS500907.3641258IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    Send to blast
MTVDESSGGS VWSREQDKAF ENALATYPED SEDRWEKIAS DVPGKTLEEV KHHYDLLLDD  60
VSRIESGCVP LPCYNSSSDS STSHGGGDEG TGKKSGNYGN SNGESNHGSG KSSRADQERR  120
KGIAWTEDEH RHHRGDGVN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A4e-20977876RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that coordinates abscisic acid (ABA) biosynthesis and signaling-related genes via binding to the specific promoter motif 5'-(A/T)AACCAT-3'. Represses ABA-mediated salt (e.g. NaCl and KCl) stress tolerance. Regulates leaf shape and promotes vegetative growth. {ECO:0000269|PubMed:26243618}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salicylic acid (SA) and gibberellic acid (GA) (PubMed:16463103). Triggered by dehydration and salt stress (PubMed:26243618). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:26243618}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019261040.12e-69PREDICTED: transcription factor DIVARICATA
RefseqXP_019261041.12e-69PREDICTED: transcription factor DIVARICATA
SwissprotQ9FNN66e-47SRM1_ARATH; Transcription factor SRM1
TrEMBLA0A314LAW15e-68A0A314LAW1_NICAT; Transcription factor myb1r1
STRINGXP_009770756.12e-68(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA41492445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.13e-39MYB family protein
Publications ? help Back to Top
  1. Wang T, et al.
    Salt-Related MYB1 Coordinates Abscisic Acid Biosynthesis and Signaling during Salt Stress in Arabidopsis.
    Plant Physiol., 2015. 169(2): p. 1027-41
    [PMID:26243618]
  2. Chen YS, et al.
    Two MYB-related transcription factors play opposite roles in sugar signaling in Arabidopsis.
    Plant Mol. Biol., 2017. 93(3): p. 299-311
    [PMID:27866313]