PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Ctg13510886g00004.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family B3
Protein Properties Length: 353aa    MW: 39155.9 Da    PI: 8.8299
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Ctg13510886g00004.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B360.33.3e-192771896
                                 --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEE CS
                           B3 18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkv 96
                                 ++ +f++e++ k  +s  + l+d +g++W+v++   +++++++l+kGW++Fvk+  L +gD++vF+l+ + +++e ++kv
  Peinf101Ctg13510886g00004.1  2 ISAEFVREYMPK--TSNVIELQDCDGNKWNVRC--IRRKDQIYLSKGWSNFVKDTSLVAGDVCVFELITDiQTAEHMLKV 77
                                 77899****844..6779***************..899999*************************99887877766655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086315.115183IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.7E-22182IPR015300DNA-binding pseudobarrel domain
CDDcd100172.91E-21280No hitNo description
SMARTSM010195.2E-8283IPR003340B3 DNA binding domain
SuperFamilySSF1019361.31E-21281IPR015300DNA-binding pseudobarrel domain
PfamPF023628.4E-17277IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
NISAEFVREY MPKTSNVIEL QDCDGNKWNV RCIRRKDQIY LSKGWSNFVK DTSLVAGDVC  60
VFELITDIQT AEHMLKVHIF HSRVEESSTN LHTCSVTEPT LPVSKTCILQ FSESKDTESS  120
DASGPLSSNK TNCKTDMDKS STSQQLEESV RRGRPPKRGR PLAAEANRSI NSAKIFMPKD  180
PYFMQIHYRL RSHGNARLHH ISQDLSHGKK IGGDNDGESS VEIVNPLETE QGPESSAKSS  240
EPFHGAKKRK IAPGRHKFLR CYETRSKANR LHDKGQVLNA KNLNMIGDIS LTKPLLGKLV  300
QQNMDTSTYS AVVAGGVPNQ DNAREGSKNE VYSAVVAGGV LNQDNAREGS KNE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019262076.17e-79PREDICTED: B3 domain-containing protein Os11g0197600-like
TrEMBLA0A1J6IR523e-77A0A1J6IR52_NICAT; B3 domain-containing protein (Fragment)
STRINGXP_009613233.16e-75(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA85571529
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.11e-09related to vernalization1 1