PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Ctg13415564g00002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | B3 | ||||||||
Protein Properties | Length: 133aa MW: 15212.5 Da PI: 5.2722 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 36.2 | 1.1e-11 | 21 | 110 | 5 | 98 |
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-. CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld. 85 ++++ +++ ++lp k + +h ++ + +t+++ +W++kl +k + + +GW++Fv + gLkegD +vF+l Peinf101Ctg13415564g00002.1 21 ILSKSCIQKDDFILPPKIL-QHLPVTVVP--ITIRN-GQIEWNMKL--NKLCAKRRFFDGWSKFVTDTGLKEGDGLVFELLe 96 4455566666799999998.563343344..44444.6699*****..66555555668********************554 PP SS.SEE..EEEEE- CS B3 86 gr.sefelvvkvfr 98 + ++ + +v++++ Peinf101Ctg13415564g00002.1 97 CNnKSVKSKVQILD 110 66688888888876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.330.10 | 1.6E-12 | 11 | 110 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 8.24E-13 | 13 | 103 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 4.17E-10 | 16 | 110 | No hit | No description |
PROSITE profile | PS50863 | 11.039 | 17 | 112 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 7.6E-5 | 18 | 112 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 1.8E-9 | 18 | 110 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 133 aa Download sequence Send to blast |
MAYRNEESTP IDTSKPFFDS ILSKSCIQKD DFILPPKILQ HLPVTVVPIT IRNGQIEWNM 60 KLNKLCAKRR FFDGWSKFVT DTGLKEGDGL VFELLECNNK SVKSKVQILD GSFREELFQE 120 LGEGTSDNRV DIL |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1819 | 21 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G33280.1 | 2e-06 | B3 family protein |