PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01004434G0040
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family ERF
Protein Properties Length: 283aa    MW: 31322.3 Da    PI: 4.4473
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01004434G0040genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.72.2e-1672122155
              AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      s+y+GVr++  +grW+AeIrd +     r  r+++g+f t+e Aa+a++a + k++ 
  PH01004434G0040  72 SRYRGVRRRT-WGRWAAEIRDpV-----RkSRVWIGTFLTEEAAAAAYEATASKYRA 122
                      79*****877.**********44.....55**********99999999999999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.3E-1072122IPR001471AP2/ERF domain
CDDcd000181.95E-1472103No hitNo description
SuperFamilySSF541717.19E-1672123IPR016177DNA-binding domain
PROSITE profilePS5103220.15273130IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.7E-2173122IPR001471AP2/ERF domain
SMARTSM003804.1E-1473136IPR001471AP2/ERF domain
PRINTSPR003678.9E-97485IPR001471AP2/ERF domain
PRINTSPR003678.9E-996112IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MTPSSRKVRI FCCDPDATDS SDEDVQNTKK EKRMIREVLL PMNNSKNCKS LKTLVPCGTE  60
NLKGPEKKEP TSRYRGVRRR TWGRWAAEIR DPVRKSRVWI GTFLTEEAAA AAYEATASKY  120
RAELLAIKAQ LSVSDRAASS AAVSCVSSSV SCEQKAQQEA PKVVPIENPE PLDKSLLNFS  180
STPRANGISV DDFLGRIDEL PVSEFVGPTD ELPLDDFARL ADVFPVSDFV SATDEPLDND  240
YIGLPDISQL LLPITDPKFD LDAELDWDGF DFASMERELE IL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01004434G0040
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010238049.11e-123ethylene-responsive transcription factor ERF118
RefseqXP_010238050.11e-123ethylene-responsive transcription factor ERF118
RefseqXP_014757283.11e-123ethylene-responsive transcription factor ERF118
RefseqXP_024310935.11e-123ethylene-responsive transcription factor ERF118
TrEMBLI1IPB11e-121I1IPB1_BRADI; Uncharacterized protein
STRINGBRADI4G27850.11e-122(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50203763
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.28e-08ERF family protein