PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PH01003917G0070 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family | NAC | ||||||||
Protein Properties | Length: 164aa MW: 17665.1 Da PI: 8.5128 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 27.5 | 8.7e-09 | 8 | 124 | 3 | 123 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk.e 91 +GfrF+Ptd +l+ +L + +++ ++ i+++d + v P L ++ ++++ F + k+ + + ++g W+ + +k + PH01003917G0070 8 AGFRFDPTDADLMLGFLLPCLRSCApgADIILLIRDADPFAVSPDALLhGrRA-RPDSDTTLFLILSPKS-----PLVVGDTGAWRRQRVTKgA 95 7*******************9998844444335**************733233.3344444444444443.....345667899*988766514 PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvm 123 +s++g++v ++ L y +ge Wvm PH01003917G0070 96 AVSEDGKAVAWRRELFAY---GADGETDGWVM 124 445599999999999999...45667899999 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 12.071 | 6 | 155 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.83E-10 | 6 | 124 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.9E-5 | 8 | 124 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence Send to blast |
MAAAFISAGF RFDPTDADLM LGFLLPCLRS CAPGADIILL IRDADPFAVS PDALLHGRRA 60 RPDSDTTLFL ILSPKSPLVV GDTGAWRRQR VTKGAAVSED GKAVAWRREL FAYGADGETD 120 GWVMGFGSSV PRRAKNWCSA GSRRQSDSLM DLQVEGAHRS VQR* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | PH01003917G0070 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |