PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PH01003751G0200 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family | bZIP | ||||||||
Protein Properties | Length: 258aa MW: 27989.9 Da PI: 10.3382 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39.6 | 1.2e-12 | 66 | 107 | 5 | 43 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee...kvkeLeaeNk 43 k rr+++NReAAr+sR+RKka+i++Le + ++Le e + PH01003751G0200 66 KTLRRLAQNREAARKSRLRKKAYIQQLESgrmRLAQLEHEAQ 107 7789***********************964446777777655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-10 | 61 | 113 | No hit | No description |
SMART | SM00338 | 2.5E-8 | 62 | 127 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.588 | 64 | 101 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.2E-10 | 66 | 108 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.75E-8 | 66 | 113 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 69 | 84 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence Send to blast |
MTSSAPHAAG SSRRSPPSKA AGGPLAIGKG SKAAFKREGS STGKRSSTAA TASSSELEGP 60 KTPDPKTLRR LAQNREAARK SRLRKKAYIQ QLESGRMRLA QLEHEAQMTR AQIVLRHVEP 120 LTEQQLVGVC GVQQSAKREE DALDGELEAL LRSLSEVVSS SDALQPPPMV YYHPADMAGY 180 MGHYVSLAMD KLASLETFLR QADELRLQTL HTLPQILTVR QSARCFVAID EYFGRLRALS 240 TLWTTSRPPA VARDPAG* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | PH01003751G0200 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK119909 | 2e-50 | AK119909.1 Oryza sativa Japonica Group cDNA clone:002-183-A10, full insert sequence. | |||
GenBank | CT833105 | 2e-50 | CT833105.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA207O13, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002438679.1 | 1e-55 | transcription factor TGAL8 isoform X1 | ||||
Refseq | XP_021304565.1 | 9e-56 | transcription factor TGAL8 isoform X2 | ||||
Swissprot | Q69T21 | 9e-44 | TGAL8_ORYSJ; Transcription factor TGAL8 | ||||
TrEMBL | M8AM87 | 4e-61 | M8AM87_TRIUA; TGACG-sequence-specific DNA-binding protein TGA-2.1 | ||||
STRING | TRIUR3_24613-P1 | 6e-62 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12972 | 21 | 26 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06839.1 | 2e-27 | bZIP family protein |
Publications ? help Back to Top | |||
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