PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01003297G0100
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family G2-like
Protein Properties Length: 334aa    MW: 36289 Da    PI: 7.9875
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01003297G0100genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like97.97.3e-31210265156
          G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                      k+r++W+peLH++Fv  ++qLGG+++AtPk+i+e+mkv+gLt+++vkSHLQkYRl+
  PH01003297G0100 210 KTRRCWSPELHRQFVATLRQLGGPQVATPKQIREVMKVDGLTNDEVKSHLQKYRLH 265
                      68****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.282207267IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.9E-27208268IPR009057Homeodomain-like
SuperFamilySSF466896.27E-16208268IPR009057Homeodomain-like
TIGRFAMsTIGR015578.7E-25210265IPR006447Myb domain, plants
PfamPF002491.6E-5212263IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MGLDLKLFAA RSAGRMAAAA KDAPAVDACI RSLEEEHRKI EMFRRELPLC VRLLADVIEV  60
MKEEAGKRRG DGDAEAKAED GDKRKWMSTA QLWIDSRVSD ADSEKEQESE STSPESKLRG  120
GAPVPLRAVG CGAPALPPYF GREERVASTV GLPGLPLMSP AVKRPISPVT AGDDHRHAVT  180
ARFAAAMPPS GPVLSLQTQT QEQQQQQARK TRRCWSPELH RQFVATLRQL GGPQVATPKQ  240
IREVMKVDGL TNDEVKSHLQ KYRLHNRRLP GAAPASQPIV LLGDLWVPQE QSSSQSGSPQ  300
GPLQFSGSGV AVSVDTVGDS YEEDDRSEGY SRK*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01003297G0100
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010229377.11e-142transcription factor HHO5
TrEMBLI1GMZ11e-141I1GMZ1_BRADI; Uncharacterized protein
STRINGBRADI1G07630.11e-142(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP181737107
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.14e-42G2-like family protein