PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01002603G0250
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family bZIP
Protein Properties Length: 349aa    MW: 38121.1 Da    PI: 6.8655
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01002603G0250genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1491.3e-15241285448
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                      ++r++r++kNRe+A rsR+RK+a++ eLe+k   Le+eNk+Lk e
  PH01002603G0250 241 DRRQKRMIKNRESAARSRARKQAYTNELENKLSILEEENKKLKRE 285
                      68****************************************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.4E-13238302IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.22240285IPR004827Basic-leucine zipper domain
CDDcd147072.51E-22242293No hitNo description
Gene3DG3DSA:1.20.5.1701.6E-13242285No hitNo description
PfamPF001701.7E-13242285IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.0E-11242287No hitNo description
PROSITE patternPS000360245260IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MASQSGSAAV TANGQHRAHI QTLVRQGSLY DLTLNEVESH LGEPLLSMNL DDLIRSVLPD  60
DMNLPLPNGV GSSGSRSTSV SGLERQGSSI TMPPALSKKT VDEVWRDIQH DQESSDDERS  120
SGCEVRLTLG EITLEDFLHR AGIITGQCRK DVDELIGHVG TGGGAHLMTT VQDFPQGTSA  180
LDAYIIHQSI AQPLSIAIPS TMDALYPDGQ MSISPSVALS DPQTPNRKRM SSEDVVYKVV  240
DRRQKRMIKN RESAARSRAR KQAYTNELEN KLSILEEENK KLKREKFAFL RSKDEFTSIA  300
SPNNLHLGLS SFLSVINKIK AWLFAHFSYT VLLINAPQPK GGNAGMIA*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01002603G0250
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003578996.11e-166ABSCISIC ACID-INSENSITIVE 5-like protein 2
RefseqXP_010238783.11e-166ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLI1IUU31e-165I1IUU3_BRADI; Uncharacterized protein
STRINGBRADI4G43850.31e-166(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1859879
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.17e-48ABA-responsive element binding protein 3